| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0628 |
|---|
| Symbol | |
|---|
| ID | 8752284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 669433 |
|---|
| End bp | 671157 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | LamG domain protein jellyroll fold domain protein |
|---|
| Protein accession | YP_003407778 |
|---|
| Protein GI | 284989224 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAC ACCACCCCCA CCCGCTCCGA GCCGGGCGTG TCCGGCTGCG GCGGCCCGCG
CCCCGCGCCG TGCTGGCCGG CTGCGCAGCC CTGTTGACCG TCGGCCTGGC CGTCGCCGCA
CCCGGCGGGG CCTGGGCGGC GTTCACCGGC ACCACCGCCA GCACGGGCAA CCAGCTGGTG
ACCGAGGCCG CCTTCCCCGA CTACCGCACC GCCGTGCAGC GGAGCGGCCC CGTCATCCAC
CACCCCTTCG ACGACCCCTA CGGCAGCGGG ACCGCCGCGG CGCTCGTCGG CAGCACCGGC
ACGTACAACG GTGCGGCAGC AGCCTCCTCG GTCGGCACCG GGGCGATCGC GGCGAGCGCG
GGAGGGCCCC GACGGGCCGT GCACTTCCCG GAGAGCGCCT ACGCCGCGGC CGACGGCACG
ACCTCGCTCA CGGGCGCCGT CACCGGCGCC AACACGGCTC CGGTGAAGCT GACCCTGGAG
GCCTGGGTGC GCACCGGCCA CGGCGGGGCG GTGGTGAGTC TCCTCCCCGA GGGCTCCTCC
GCGACCCCCG GCAGGACCCA GCTCTACGTC AACGAACGCG GTCAGGTCTG CGTCGGCCTG
ACCCTGGACC CCGCGACCAC CCTGCAGGAG GTGTGCGGGT ACGACGCCGC CGACCCGAAG
GCCTGGACCT CCGCCGACCG GGCCAGCCCG GCCTGGCACC ACCTCGTCGC GGTGATCGAC
CCCAGCGGCC AGCCCGGCAG TGTCCCCTGC GGCTCGGACG GGACCCAGGT GCTCGTCTAC
GTCGACGGCA CCGTTGCCTA CGACCGCGGA TTGTGCGGCA CCTGGCCGCA GACCGTGGCG
GGGCGCTGGC GGGTGGGCAC CGCCCCGATC ACGACCGACG TCATCAACCC CGACCCGGCT
CAGGAGCTGG AGGGCCCGGC GCCGGACACC TGGTCCGGCG ACATCGACGA GGTCGCCGTC
TACGCCGGGG TGCTGAACGC CACCGAGGTC AAGAAGCACT ACGACATGGG CAAGGGCACG
GTCGCCGGCA CCTACGCGAC GTCGGTGAAG GCGTTCCCGG CCCTGCACCT GTACTGGCAG
CTGGATGACG TCCCCGGGCC CGAGGCCCGC GCCGTCGTCG ACGCCTCGCC CAACGCCCGC
GACGGCACCT TCTCCAGCTA CCCCGACCTG GGAGTGACCG GGGCACCCAC CGGGACGACG
ACCACCGGGA CCGCGGTCAG GCTCAGGGGT GTCAACGACA TCTCCACCGG CGCCAGCCGC
ACCACGCCCG CCGCCTTCTC CACCGAGGTG TGGTTCAACT CCTCCGGAGG AACCGGGCCG
CTGGCCAGCT TCGGCCCCAC CCAGACGGGC ACCTCGACGG TCCCGGACTG GGCGGTCCAC
CTGACCGCCA ACGGGAACCT GGCCTTCAGC ATCCGCACCC CCCAGCGGAC GGTCCTCACC
GCACGCGACC ACCGCGACGG TGCGTGGCAC CTGGTGACCG CGACCATGAG CGCCGGTGGG
CGCATGCGGC TGTACGTCGA CGGCGTGCTG GTGGGGGAGG ACGTGTCGTC CACGACGCCC
TCGCCCCGCA CGGGCTTCTG GCGCTGGGGT GGTGGTGGCG ACTACAGCGC CTTTGCCACC
CGGCCGGGAG CGGCGTTTCT CTCCGGCCGG CTGGACGAGG CGTCCGTGTA CGACCGGGAG
CTCACGCCGG AGGACGTCGC CATCCACTGG GGTGCCGGCT TCTGA
|
|---|
| Protein sequence | MSGHHPHPLR AGRVRLRRPA PRAVLAGCAA LLTVGLAVAA PGGAWAAFTG TTASTGNQLV
TEAAFPDYRT AVQRSGPVIH HPFDDPYGSG TAAALVGSTG TYNGAAAASS VGTGAIAASA
GGPRRAVHFP ESAYAAADGT TSLTGAVTGA NTAPVKLTLE AWVRTGHGGA VVSLLPEGSS
ATPGRTQLYV NERGQVCVGL TLDPATTLQE VCGYDAADPK AWTSADRASP AWHHLVAVID
PSGQPGSVPC GSDGTQVLVY VDGTVAYDRG LCGTWPQTVA GRWRVGTAPI TTDVINPDPA
QELEGPAPDT WSGDIDEVAV YAGVLNATEV KKHYDMGKGT VAGTYATSVK AFPALHLYWQ
LDDVPGPEAR AVVDASPNAR DGTFSSYPDL GVTGAPTGTT TTGTAVRLRG VNDISTGASR
TTPAAFSTEV WFNSSGGTGP LASFGPTQTG TSTVPDWAVH LTANGNLAFS IRTPQRTVLT
ARDHRDGAWH LVTATMSAGG RMRLYVDGVL VGEDVSSTTP SPRTGFWRWG GGGDYSAFAT
RPGAAFLSGR LDEASVYDRE LTPEDVAIHW GAGF
|
|---|
| |