Gene Bfae_02880 details

Gene Information

• Locus tag: Bfae_02880
• ID: 8398836
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachybacterium faecium DSM 4810
• Kingdom: Bacteria
• Replicon accession: NC_013172
• Strand: +
• Start bp: 335188
• End bp: 340938
• Gene Length: 5751 bp
• Protein Length: 1916 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644996378
• Product: PDK repeat-containing protein
• Protein accession: YP_003153754
• Protein GI: 257067499
• COG category: [R] General function prediction only
• COG ID: [COG3291] FOG: PKD repeat

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCAGG CAATGCGTCG GTTGTCGAGA AGCGCGGGCA GGGTGCTCGC CCTCCTCCTG 
ACGATCGCGG TCATCGGAGC GGGGCTCATG GTCCTCACCC GTCCCCGTGC AGAAGCGGAT 
GAGGCTGCGC TGCCCTCCCC GCCTCCGCTG CTCCAGAGGG AGGAGAACGT CGTCACCTCG 
GACCCGATCC CGACAGTGCA GATCGACAAC GGGTACGTCT GGTCCCAGGC CACCATCGGC 
ACCACCGTGT ACGCGGTAGG CGACTTCGAC AACGCACGGG CACCGATGGC GAACCCGGGC 
ACCCAGCTGA CCGCGCGCTC GAACGTGCTC GCCTACGACA TCGAGACCGG GGCGCTGCTC 
CCCTTCGCAC CGCAGGTCAA CGGGGTCGTC AAGGCAGTCG CCGCTTCCCC CGACGGCAGC 
CGGATCTACA TCGGCGGCTC CTTCACCTCG GTCAACGGCC AGGCGCGATG GAACATGGCC 
GCGCTCGACG CGGCGACCGG CGAGCTGATC TCGAGCTTCA AGCCCGCCAT CGGAGGGACT 
GGGGTCTATG CCCTGGTCGC CGATGGCTCG ATGGTCTATG CAGGAGGGCT CTTCACTCAG 
GGCAACGGGA CGCCGCGCAA GAATCTTGCA GCGTTCAACG CCGCCAACGG CGCCCTCATG 
CCCTGGGCGC CGGAGACGGA CCTCCAGGTC GACGCCATGG TCGCCGATCC CGGGGGCGAC 
AAGATCGTCG TCGGTGGCCG GTTCTCTCGC GTCAACGGCA ACACGAGGAT GCGCGGCGCG 
GCTGCAGTGG ATCGCAGCAC AGGCGCTGTG GACACCGACT GGGAACTGGT CCAGACGGTC 
AAGAACGGTG CGACGAACGG CAAGGCGGGC ATCTTCTCGC TGGCCGCAGA TGATTCCGCC 
GTCTACGGCA CGGGCTGGGT CTACGCCGGA GTGACGATCG GCAACCTCGA GGGAACCTTC 
GCCGCGGAGG CCGATTCCGG AGACGTCCGA TGGATCGCCG ACTGCCTCGG TGACCACTAC 
GGCGTCTACT CCACCGGAGA GACGGTCTAC ACCACGAGCC ACACCCACGC CTGCTCGACG 
ATGGGCCTCC ATCCCGAACA GAGCCCCCGC GAGCATCGCT ATGCCGAGGC CTACACCGCG 
GACGTGCGCG GCACCCTCGG CCGGAACCCG CACGCCGGCG GCACCTACCA GAACTGGGAG 
GGCACCCCGG CTCCCTCGGC GTACGCCTGG TACCCCGATT TCTACGTCGG CACCACGACC 
GGGATGGGGC AGGCCGGTCT CTCGATCACC GGGGTCGGCG ACACGATCTC GATCGCCGGA 
GAGTTCCAAG GCGTGAACCA GGGGCGCTTC GAGGGCATCG TCCGCTTCTC CACCGATCCG 
CCGAACGGTG CGAAGGACGG GCCCCGTCTC AGCTCGAGCA ATTGGCAGCC CTCCGCCTCC 
TCGGCCGCTC CGGGAAGGAC CAGGATCTCC ATCCCGGCCA ACTGGGACCG CGACGACCTC 
ACACTGACCT ATGAGCTCCG GCGAGCCGGG AGCAGCGATC CCGTGGCGAC GCTGACCAAG 
GACTCGACGT GGTGGAACCA GCCCACGGTG ATCCTCGAGG ACACCACGGC CGTCCCGGGC 
ACCTCGCCCG CATACACCGT CGTGGCACGA GACGGTGACG GCAACAGTCG AACGAGCGCA 
CCGGTCACGG TGACCGTGGC CGCGGGGACT GCAGCGGCGT ACACGGACGC CGTGCTCGAC 
GACGACCCGA TCCTCTACTA CCCGCTCGGC TCCACCTTGC AGGACTGGGC GGGGACCACC 
CCCGCGACTG CAGGCAGCGG CGTCTCGGCG GGTACTCCCG GCATCCCGAA CTCCGACACC 
GGTCATTCCG AGCTCAGCGG CAGCTCGTCG GGCCGCATCT CCTCGAGCGC GCGCGTCGAC 
GTCGGGACGG AGTTCTCCAC CGAGCTGTGG TTCCGCACGA CCACGGGTCA GGGTGGGAAG 
CTGCTCGGGT ACGGGGATTC CGCTTCCGGA ACTTCCGGCA GCTATGACCG CCACCTGTAC 
ATGCAGAACA ACGGTCGTCT CGTGTTCGGG GTCTATCCCG GCGAGGTACG GACTGTCCAG 
AGCCCCGAGA GATACGACGA CGGACAATGG CACCACGCGG TCGCCACGCT GAGCGCCGCG 
GGGCAGCAGC TGTACGTGGA CGGAGAACTC GTCGCCTCCG ACCCATCGAC CTCCTCGGCC 
CAGGCGTACC GAGGGTACTG GCGGATCGGT GGTGACAGCC TCAGCGGCTG GCCGGACCGC 
CCGTCCTCCG ACTTCTTCCG GGGGTCGGTC GACGAGGTTG CTGTCTACGA TCGTGCTCTC 
ACGTCGGCGC AGATCAGCGC CCACTACGCC GTCGGTGCCG GGATCGAGCC GCCCGAGGCC 
GATTTCGAGG TATCCACCGA TGGTGCAGAG GTCGCGGTGG ACGCCATCGG CTCTTCGGCC 
GCGGGTGACG CGACGATCGT TGAGTACCGC TGGGACTTCG GCGACGGCAC CCCCACCGTC 
ACCGGCGCGA CGGCGTCCCA CACCTACGAG GCCACGGGGA CGTTCACTGT GACCCTCACC 
GTCCGGGACA GCAACGGACT GCTCGACTCC TTCTCCCGCG AGGTCCCGGT GCTCGGTCCG 
AACGCTCCGC CGACGGCTGC CTTCTCAGTG GACGCGGCAG GCCTGAGCGT GACCGCGGAC 
GGCGCCGCAT CACATGATCC CGACGGGACC GTGGCCTCGT ACGAGTGGGA CTGGGGCGAC 
GGCACCACCT CGACCGGCGC TGTCTCCTCA CATGCCTATG CGAGTGCCGG CGACTACACC 
ATCACGCTCA CTGTCACCGA TGACCGCGAC GCCGAGGCCG AGGCCTCGCA GGTCCTCACC 
GTGACCCACG ATGACCCCGT GGCACGGTTC TCGACGACCG CCAGCGGGCG CTCGATCACA 
GCGGACGCGG GAGAGTCGAC GGCGTCCGAC GGCGCCTCGC TCGAGTACAC CTGGGACTGG 
GGGGATTCGA GCACCTCGAG TGGTGCCGTC GGCACCCACG CCTATGCCGA AGACGGCGTC 
TACGAGATCA CGCTGAACGT CACCGATTCC CTCGGCGCCA CCGCGCAGAC CTCGCAGTCC 
GTCACGGTGG CGGCTGAGGC CCTCGCCGCC TCCGACACCT TCTCCCGCAC CGTGAGCAGC 
GGGTGGGGAG CAGCCGATGA AGGAGGGACA TGGACCCCGG TGGGCGGCAG CGCTTCGGCG 
GGCTCCGTCG AAGACGGGGT CGGTCGGCTG ACCTTCGCGC CCGGGAACGG TCAGAGCATG 
GTTCTCCCCG CGACATCCGT GGCGCAGAGC AGCACCGAGA TGACGTACAC GCTCGAAGGG 
GCGCCGTCCA CCGGTGCTGT CTACGTCGGC ACCGAAGCGC GGTACGTCAG CGGAAGCAGC 
TATCGCACCC TCGTCTGGCA CCGTGTGGAC GGTACCTCCT GGCTGCTCAT CCAGCGCAAC 
GGGGCGATCA TCGCCTCGCA GCCCGGGGCG CCGGGCTCGT GGGAGGCGGG GAGCTCTTTC 
CACCTCCGTG CCGAGGTTGT CGGCGAGGCC GAGCCCAGCA TTCGGATGAA GGTCTGGCCT 
GCTGGCTCCG CCGAACCTTC CGGCTGGCAG CTCGAGACCA CCGATACCGC CGCTGAGGCC 
CTCACCGATG CCGGTGCCTC CGCGGTGTAT GCCTACCGGG CCGGCTCGGG ATCGGGCGCA 
GCCCCTGTCA CGGTCGACGA CTACCGACTT CGCGACCTCA GCGGTCCGCA GCCCCAGCCG 
CCCAACGAGG CTCCGGTCGC CTCGTTCACC AGCTCGATCT CCGGGAGGAT GGTGACGGTC 
GACGGCAGCA CGTCGACCGA CGCCGACGGT TCGATCGTCA CCTACGCGTG GACGTTCGGG 
GACGGCGAGA CCGCCTCGGG AGTGACGGCG AACCATGAGT ACGCCGCCGC CGGCTCGTAC 
ACCGTGACCC TCACCGTGAC CGACGATGAC GGGGAATCCC ACACCGCGAC CTCCACCGTG 
GTCGCGACCG ACGAGGTGCA TGCCGCGTCG GACACCTTCG AGCGCACGAC GACCGCGGGC 
TGGGGCACGG CCGACGTCGG TGGCGCGTGG AGCGTCAGAG GTGGTGCTGC CAGCATGGCC 
GAGACGACAG ATGGCGACGG GGTGCTGACG CTGCGGCCAG CGGATGGACT CAGCATGGTG 
CTGCCGGCCA CGGACCTCGG TGACAGTTCC ACCGCGGTCT CCTACACACT CACCGGTGCT 
CCATCCACGG GTGCTGCCTA CGTCGGGATC GAGTCCCGGT TCGACGGCTC CAGCACCTAT 
CGGTCGACGG TCTGGCACCG AGCCGACGGC ACCGTCTGGC TGCTCGTCCA GCGCAATGGG 
GCTGTCATCG CCTCGCAGCC GTTGACGGGC CGCACCTGGG GTGCCGGGGA CACCTTCCGC 
CTCCGCACGG AGGTGACCGG CGACAGCACG ACGACGGTCC GCCTCAAGCT TTGGAGCGGC 
GGAGCGGTGG AGCCTCCCAG CTGGCAGCTG GAGGTGACGG ATGACGAAAG TTCCGCTGAG 
ACAGCTTCGG GGTCGGCGGG TCTCTACGCC TACAGGGCGG GAAGCGGAAC GGGCCAGACG 
TCAGTTCGTT TCGACGATCT CGCGGTGAAG GCCGCCGGTT CCGACGATGT GAACATGCTT 
CGCTCGAGCC AGAACGAGGA GCCCGTCGGC AACGCTCCCG ATCGCGAGGG CTCCGTGTCC 
GCGCCGACAG GAGGGCCCGA CGGCGACGAG GACGAGCCGG TCGAGGAGAC GGCCGATCCG 
GAGGGTGCCG ATGTCGAGAC CGACGCGGTT GCTCCCGAGA GCTCGGGGGC GGTGGCTCCG 
GACGACGGAT CCGCGGAGGC GGCGGACGAT GAGGAAGCCG CAGCCCCGGA GGACGAGGCT 
GATGGTGCGC TGGAGAGCGA CGCAGATGTC GAGCCTGACG CTGACGCTGA CGCTGACGCT 
GACGCTGACG CTGACGCTGA CGCTGACGCT GAGGGGAAGG CTGACTCCGA CTCCGACACC 
GTGGCTGAAC CGGAGGCTGA CGCCGAGGCC GATAGTGAGG CGGAGCGTGA GGAAGATGAC 
GCTTCTGAGG AGGGCCACGC CGCAGACGAC AGTGCGAGCG GTGACGACTT TGAGCGCGAC 
GATGCTCCGA CATGGGGTGG CAACGCGCGC GGTGATCAGT GGCTGATCGA GGGGGTCCCC 
TCCTCGGCGG CGACCATCGA AGACGGTGCC GGCCGAATTG CTCTCGAACC TGGCGATGAG 
GGCACAGCGC TGCTGGAGGG CACCGATATC GCAGACGGTA TTTTCGAGGC GGAGTTCCGC 
GTCGAGGAGG GCGCAGAGCC CGCTGGCAGC GATGTCGGAA TCGCCGCGAG GGCCTCGAAG 
CAGGGCGGGT ACCACGTAGT CGCCCATGCC GATGTGGGTG GAGCGATCAC GCTGCGCCTG 
CTCGCCGAAG GCGAGGTTCT CGCCTCCCAG ATGGTTGAGG GGCTGCACCT GGAAGCTGGG 
GCCTCGTACA CGATGCGCCT GTCCGTGTCC GGCACGGAGC AGACTGGTGT GAATGCGATG 
CTTTGGAAGA GTGGAGAAGA GGAGCCTGAT GAGTGGCAGC TCACGGCCAC GGTCGACGCA 
GAACAGCTCT CGCGCAGTGG TCGCGCCGGC CTCGTCATCG GACGGAGTGA TGAAGCACAG 
GCACCATCCG CCGTCTCGGT CGAACGGTTC GAGGCGGTGG CCTCCGCATA G 

 

Protein sequence

MVQAMRRLSR SAGRVLALLL TIAVIGAGLM VLTRPRAEAD EAALPSPPPL LQREENVVTS 
DPIPTVQIDN GYVWSQATIG TTVYAVGDFD NARAPMANPG TQLTARSNVL AYDIETGALL 
PFAPQVNGVV KAVAASPDGS RIYIGGSFTS VNGQARWNMA ALDAATGELI SSFKPAIGGT 
GVYALVADGS MVYAGGLFTQ GNGTPRKNLA AFNAANGALM PWAPETDLQV DAMVADPGGD 
KIVVGGRFSR VNGNTRMRGA AAVDRSTGAV DTDWELVQTV KNGATNGKAG IFSLAADDSA 
VYGTGWVYAG VTIGNLEGTF AAEADSGDVR WIADCLGDHY GVYSTGETVY TTSHTHACST 
MGLHPEQSPR EHRYAEAYTA DVRGTLGRNP HAGGTYQNWE GTPAPSAYAW YPDFYVGTTT 
GMGQAGLSIT GVGDTISIAG EFQGVNQGRF EGIVRFSTDP PNGAKDGPRL SSSNWQPSAS 
SAAPGRTRIS IPANWDRDDL TLTYELRRAG SSDPVATLTK DSTWWNQPTV ILEDTTAVPG 
TSPAYTVVAR DGDGNSRTSA PVTVTVAAGT AAAYTDAVLD DDPILYYPLG STLQDWAGTT 
PATAGSGVSA GTPGIPNSDT GHSELSGSSS GRISSSARVD VGTEFSTELW FRTTTGQGGK 
LLGYGDSASG TSGSYDRHLY MQNNGRLVFG VYPGEVRTVQ SPERYDDGQW HHAVATLSAA 
GQQLYVDGEL VASDPSTSSA QAYRGYWRIG GDSLSGWPDR PSSDFFRGSV DEVAVYDRAL 
TSAQISAHYA VGAGIEPPEA DFEVSTDGAE VAVDAIGSSA AGDATIVEYR WDFGDGTPTV 
TGATASHTYE ATGTFTVTLT VRDSNGLLDS FSREVPVLGP NAPPTAAFSV DAAGLSVTAD 
GAASHDPDGT VASYEWDWGD GTTSTGAVSS HAYASAGDYT ITLTVTDDRD AEAEASQVLT 
VTHDDPVARF STTASGRSIT ADAGESTASD GASLEYTWDW GDSSTSSGAV GTHAYAEDGV 
YEITLNVTDS LGATAQTSQS VTVAAEALAA SDTFSRTVSS GWGAADEGGT WTPVGGSASA 
GSVEDGVGRL TFAPGNGQSM VLPATSVAQS STEMTYTLEG APSTGAVYVG TEARYVSGSS 
YRTLVWHRVD GTSWLLIQRN GAIIASQPGA PGSWEAGSSF HLRAEVVGEA EPSIRMKVWP 
AGSAEPSGWQ LETTDTAAEA LTDAGASAVY AYRAGSGSGA APVTVDDYRL RDLSGPQPQP 
PNEAPVASFT SSISGRMVTV DGSTSTDADG SIVTYAWTFG DGETASGVTA NHEYAAAGSY 
TVTLTVTDDD GESHTATSTV VATDEVHAAS DTFERTTTAG WGTADVGGAW SVRGGAASMA 
ETTDGDGVLT LRPADGLSMV LPATDLGDSS TAVSYTLTGA PSTGAAYVGI ESRFDGSSTY 
RSTVWHRADG TVWLLVQRNG AVIASQPLTG RTWGAGDTFR LRTEVTGDST TTVRLKLWSG 
GAVEPPSWQL EVTDDESSAE TASGSAGLYA YRAGSGTGQT SVRFDDLAVK AAGSDDVNML 
RSSQNEEPVG NAPDREGSVS APTGGPDGDE DEPVEETADP EGADVETDAV APESSGAVAP 
DDGSAEAADD EEAAAPEDEA DGALESDADV EPDADADADA DADADADADA EGKADSDSDT 
VAEPEADAEA DSEAEREEDD ASEEGHAADD SASGDDFERD DAPTWGGNAR GDQWLIEGVP 
SSAATIEDGA GRIALEPGDE GTALLEGTDI ADGIFEAEFR VEEGAEPAGS DVGIAARASK 
QGGYHVVAHA DVGGAITLRL LAEGEVLASQ MVEGLHLEAG ASYTMRLSVS GTEQTGVNAM 
LWKSGEEEPD EWQLTATVDA EQLSRSGRAG LVIGRSDEAQ APSAVSVERF EAVASA