45 homologs were found in PanDaTox collection
for query gene Gobs_0315 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_0315  PPOX class putative F420-dependent enzyme  100 
 
 
137 aa  274  3e-73  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8501  hypothetical protein  52.99 
 
 
137 aa  144  6e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2150  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  54.89 
 
 
152 aa  138  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00352204  n/a   
 
 
-
 
NC_013441  Gbro_2533  PPOX class putative F420-dependent enzyme  54.26 
 
 
147 aa  136  1e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_19860  Pyridoxamine 5'-phosphate oxidase  50.36 
 
 
152 aa  135  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.00417181  hitchhiker  0.000280532 
 
 
-
 
NC_009921  Franean1_2174  pyridoxamine 5'-phosphate oxidase-related FMN-binding  51.85 
 
 
155 aa  134  6.0000000000000005e-31  Frankia sp. EAN1pec  Bacteria  normal  normal  0.794209 
 
 
-
 
NC_014211  Ndas_5438  putative F420-dependent enzyme  53.91 
 
 
150 aa  133  8e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5129  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  53.97 
 
 
135 aa  129  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.583553  n/a   
 
 
-
 
NC_008705  Mkms_5218  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  53.97 
 
 
135 aa  129  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5509  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  53.97 
 
 
135 aa  129  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10122  hypothetical protein  47.18 
 
 
144 aa  125  1.0000000000000001e-28  Mycobacterium tuberculosis F11  Bacteria  normal  0.0196572  normal 
 
 
-
 
NC_009338  Mflv_1079  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  49.23 
 
 
142 aa  125  2.0000000000000002e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.17105  normal 
 
 
-
 
NC_013235  Namu_2018  pyridoxamine 5'-phosphate oxidase-related FMN- binding  49.19 
 
 
149 aa  122  1e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000328973  normal  0.0172812 
 
 
-
 
NC_008578  Acel_1464  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  46.88 
 
 
200 aa  121  4e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  49.29 
 
 
170 aa  120  6e-27  Frankia sp. CcI3  Bacteria  normal  0.0139978  normal  0.4191 
 
 
-
 
NC_013131  Caci_7347  pyridoxamine 5'-phosphate oxidase-related FMN- binding  47.41 
 
 
143 aa  120  7e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0682808 
 
 
-
 
NC_012669  Bcav_2731  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  49.65 
 
 
145 aa  117  3.9999999999999996e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.220179  normal 
 
 
-
 
NC_008726  Mvan_5743  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  47.9 
 
 
164 aa  112  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.2084 
 
 
-
 
NC_009523  RoseRS_2956  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.86 
 
 
138 aa  99.8  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1856  nitroreductase  32.03 
 
 
350 aa  72  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0973  nitroreductase  35.88 
 
 
348 aa  65.5  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_3401  PPOX class putative F420-dependent enzyme  40.74 
 
 
168 aa  59.3  0.00000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  31.82 
 
 
163 aa  57.4  0.00000006  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal 
 
 
-
 
NC_013441  Gbro_3217  PPOX class putative F420-dependent enzyme  30 
 
 
166 aa  54.3  0.0000005  Gordonia bronchialis DSM 43247  Bacteria  normal  0.732162  n/a   
 
 
-
 
NC_009338  Mflv_0791  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.11 
 
 
165 aa  54.3  0.0000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0059  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.67 
 
 
165 aa  50.1  0.00001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.291977 
 
 
-
 
NC_014158  Tpau_3814  PPOX class putative F420-dependent enzyme  30 
 
 
165 aa  48.5  0.00003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1069  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  33.71 
 
 
158 aa  48.5  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  32.63 
 
 
169 aa  45.1  0.0004  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_013595  Sros_8252  hypothetical protein  28.72 
 
 
154 aa  45.1  0.0004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.625499  decreased coverage  0.00874096 
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.63 
 
 
169 aa  45.1  0.0004  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.63 
 
 
169 aa  45.1  0.0004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0501649 
 
 
-
 
NC_008148  Rxyl_0524  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  32.62 
 
 
134 aa  44.3  0.0005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.207279  n/a   
 
 
-
 
NC_013131  Caci_6484  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.11 
 
 
122 aa  43.9  0.0007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1804  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.15 
 
 
155 aa  43.1  0.001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.63261  normal  0.464449 
 
 
-
 
NC_013131  Caci_2179  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28.07 
 
 
151 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2812  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.13 
 
 
165 aa  42  0.003  Nocardioides sp. JS614  Bacteria  normal  0.705928  n/a   
 
 
-
 
NC_007575  Suden_1961  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.8 
 
 
157 aa  41.6  0.004  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.0000000988174  n/a   
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  37.5 
 
 
141 aa  41.6  0.004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_013235  Namu_4839  pyridoxamine 5'-phosphate oxidase-related FMN- binding  38.55 
 
 
132 aa  41.2  0.005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3705  pyridoxamine 5'-phosphate oxidase-related FMN-binding  30.77 
 
 
152 aa  41.2  0.005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3648  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.7 
 
 
176 aa  41.2  0.005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1153  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28.12 
 
 
155 aa  40.8  0.006  Jonesia denitrificans DSM 20603  Bacteria  normal  0.276564  normal 
 
 
-
 
NC_009338  Mflv_1098  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.79 
 
 
151 aa  40.4  0.009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.237863  normal  0.666068 
 
 
-
 
NC_012669  Bcav_3863  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  29.84 
 
 
154 aa  40  0.01  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.673167  normal  0.145869 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>