Gene Caci_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2179 
Symbol 
ID8333524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2472212 
End bp2472667 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content67% 
IMG OID644955329 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003112939 
Protein GI256391375 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC GGGACCGCAT CCGGATGTCC GATGAAGAGA TCGAAACCTT TTTCGCGGCG 
GGGCGCAAGC TCCAGGTCGC CTCGGCGAAC GCCGACGGCA CGCCGCACCT GGTGACCATG
TACTACGCGC AGCTGGACGG CGACCTGGCG TTCTGGACGT ACGGCAAGTC CCAGAAGACG
GTCAACCTGC GCCGCGACCC GCGCATCACA TGCCTGGTCG AGGACGGCAT CGCCTACGAC
GAGCTGCGCG GCGTCACTGT CTACGGCGAC GTGGAGCTGA TCGAGGACTA CGACCAGATC
CTGTCCTTCG GCATGGCCCT CACGGCCCGC TATCCCGAGG TCTTCGGCGC CGACCCCGAG
GCGATGCGGC CCTTCGTCGA GCAGCAGGCG CACAAGCGCG TGGTGGTCCG AGTGCGCGCC
AAGCGGACTG CGTCCTGGGA CCACTCGAAG ATGTGA
 
Protein sequence
MSQRDRIRMS DEEIETFFAA GRKLQVASAN ADGTPHLVTM YYAQLDGDLA FWTYGKSQKT 
VNLRRDPRIT CLVEDGIAYD ELRGVTVYGD VELIEDYDQI LSFGMALTAR YPEVFGADPE
AMRPFVEQQA HKRVVVRVRA KRTASWDHSK M