42 homologs were found in PanDaTox collection
for query gene Franean1_2174 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_2174  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
155 aa  311  2.9999999999999996e-84  Frankia sp. EAN1pec  Bacteria  normal  normal  0.794209 
 
 
-
 
NC_013595  Sros_8501  hypothetical protein  62.32 
 
 
137 aa  164  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  56 
 
 
170 aa  155  2e-37  Frankia sp. CcI3  Bacteria  normal  0.0139978  normal  0.4191 
 
 
-
 
NC_013159  Svir_19860  Pyridoxamine 5'-phosphate oxidase  56.34 
 
 
152 aa  148  3e-35  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.00417181  hitchhiker  0.000280532 
 
 
-
 
NC_013441  Gbro_2533  PPOX class putative F420-dependent enzyme  57.04 
 
 
147 aa  147  6e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5438  putative F420-dependent enzyme  49.35 
 
 
150 aa  142  2e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2150  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  52.41 
 
 
152 aa  137  3.9999999999999997e-32  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00352204  n/a   
 
 
-
 
NC_013757  Gobs_0315  PPOX class putative F420-dependent enzyme  51.85 
 
 
137 aa  134  6.0000000000000005e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7347  pyridoxamine 5'-phosphate oxidase-related FMN- binding  49.65 
 
 
143 aa  127  5.0000000000000004e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0682808 
 
 
-
 
NC_009565  TBFG_10122  hypothetical protein  49.66 
 
 
144 aa  125  3e-28  Mycobacterium tuberculosis F11  Bacteria  normal  0.0196572  normal 
 
 
-
 
NC_012669  Bcav_2731  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  53.42 
 
 
145 aa  123  9e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.220179  normal 
 
 
-
 
NC_009338  Mflv_1079  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  54.62 
 
 
142 aa  122  2e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.17105  normal 
 
 
-
 
NC_008578  Acel_1464  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  45.04 
 
 
200 aa  121  3e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2018  pyridoxamine 5'-phosphate oxidase-related FMN- binding  52.85 
 
 
149 aa  120  5e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000328973  normal  0.0172812 
 
 
-
 
NC_008726  Mvan_5743  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  53.28 
 
 
164 aa  117  7.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.2084 
 
 
-
 
NC_009077  Mjls_5509  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  53.1 
 
 
135 aa  110  5e-24  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5218  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  53.1 
 
 
135 aa  110  5e-24  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5129  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  53.1 
 
 
135 aa  110  5e-24  Mycobacterium sp. MCS  Bacteria  normal  0.583553  n/a   
 
 
-
 
NC_013525  Tter_1856  nitroreductase  40.48 
 
 
350 aa  92.8  2e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2956  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  41.09 
 
 
138 aa  85.5  3e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0973  nitroreductase  38.93 
 
 
348 aa  82.8  0.000000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_3401  PPOX class putative F420-dependent enzyme  42.16 
 
 
168 aa  69.3  0.00000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013131  Caci_2179  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28.24 
 
 
151 aa  49.7  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  33.68 
 
 
163 aa  49.7  0.00002  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal 
 
 
-
 
NC_013441  Gbro_3217  PPOX class putative F420-dependent enzyme  30.19 
 
 
166 aa  48.1  0.00004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.732162  n/a   
 
 
-
 
NC_013757  Gobs_0160  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  34.62 
 
 
123 aa  47.8  0.00006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1184  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  36.14 
 
 
141 aa  47  0.0001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.230924  n/a   
 
 
-
 
NC_008699  Noca_0947  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29 
 
 
154 aa  45.4  0.0003  Nocardioides sp. JS614  Bacteria  normal  0.011553  n/a   
 
 
-
 
NC_014165  Tbis_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  38.36 
 
 
141 aa  45.1  0.0004  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0293  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.81 
 
 
132 aa  45.1  0.0004  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A1522  hypothetical protein  30.39 
 
 
134 aa  44.7  0.0005  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.249328  normal 
 
 
-
 
NC_007355  Mbar_A3004  hypothetical protein  28.12 
 
 
134 aa  44.7  0.0005  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.146588  hitchhiker  0.00337909 
 
 
-
 
NC_008254  Meso_2284  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.34 
 
 
149 aa  44.3  0.0006  Chelativorans sp. BNC1  Bacteria  normal  0.145472  n/a   
 
 
-
 
NC_014158  Tpau_3814  PPOX class putative F420-dependent enzyme  32.71 
 
 
165 aa  44.3  0.0006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_3113  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.53 
 
 
135 aa  43.1  0.001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009051  Memar_1441  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.91 
 
 
134 aa  42.4  0.002  Methanoculleus marisnigri JR1  Archaea  normal  0.109181  n/a   
 
 
-
 
NC_008699  Noca_2812  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.15 
 
 
165 aa  42  0.003  Nocardioides sp. JS614  Bacteria  normal  0.705928  n/a   
 
 
-
 
NC_014210  Ndas_1357  putative F420-dependent enzyme  35.24 
 
 
153 aa  42  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.211634  normal 
 
 
-
 
NC_010085  Nmar_0941  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.26 
 
 
134 aa  41.6  0.004  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.150544 
 
 
-
 
NC_009338  Mflv_0791  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.47 
 
 
165 aa  40.8  0.008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6470  pyridoxamine 5'-phosphate oxidase-related FMN- binding  29.77 
 
 
128 aa  40.4  0.008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.941513  normal 
 
 
-
 
NC_009621  Smed_6269  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.49 
 
 
151 aa  40.4  0.01  Sinorhizobium medicae WSM419  Bacteria  normal  0.341844  normal  0.0782266 
 
 
-
 
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