Gene Franean1_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2174 
Symbol 
ID5670574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2609476 
End bp2609943 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID641241095 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001506516 
Protein GI158314008 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID[TIGR03668] PPOX class probable F420-dependent enzyme, Rv0121 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.794209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGG ACGAGGCCGA ATGCCGCGTT CGCTTCGCGG CGGCACGGGT CGCCCGCCTG 
GCAACGGCCG GCGTGGACGG CCAGCCGCAT CTGGTGCCGG TGACGTTCGC CCTGGACGAC
GATCAGGTCG CCATCGCCGT CGATCACAAA CCGAAGCGCT CGACGGCCCT GCGGCGGCTG
GCGAACATCG CCGCCAACCC GCGAGTCAGC CTCCTCGTGG ACCAGTACAC AGACGACTGG
GACGGCCTGT GGTGGGTTCG GGCGGATGGC CGCGCACGAG TTGTCACGGA CGGCGATGAA
GGGGTGAAGC GGGCAGTGGC GATCCACCAC CTGGCGGCAA AGTACGACCA GTACCTGGCC
GTCCCCCCGA CCGGACCAGT TGTTTTCGTC CAGATCGAGA AATGGCAGGG TTGGGCGTTC
ACAGCCCGCC AGAGGGCCCA AGGAGTCGAT GGCGCGCCGG AGACGTAG
 
Protein sequence
MNLDEAECRV RFAAARVARL ATAGVDGQPH LVPVTFALDD DQVAIAVDHK PKRSTALRRL 
ANIAANPRVS LLVDQYTDDW DGLWWVRADG RARVVTDGDE GVKRAVAIHH LAAKYDQYLA
VPPTGPVVFV QIEKWQGWAF TARQRAQGVD GAPET