| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2956 |
|---|
| Symbol | |
|---|
| ID | 5209924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3696661 |
|---|
| End bp | 3697077 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640596549 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
|---|
| Protein accession | YP_001277271 |
|---|
| Protein GI | 148657066 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03668] PPOX class probable F420-dependent enzyme, Rv0121 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAT GGGAGCGCGA TTTTATCGTG CATGGGCGCG TGGCGCGTAT GGCCACCGTC
GATGCACATG GACATCCCAG TGTTGTGCCG ATTGTGTATG CTTTCGATGA TCGGCTGTAT
ACGCCTCTCG ACGCGAAACC CAAGCGTGTC GCCGCAACGC AGTTGCAGCG TGTGCGAAAC
ATTCAAGCAC ACCCGCACGT TGCGATTGTC GTCGATCACT ATAGCGAAAA CTGGAGCGAT
CTGGCATGGG TGCTGATCCG CGGAACGGCA GACATCGTCA CCGACGGACC GATGTATGTG
ACCGGCATTG AACTGTTGCG TCAGAAGTAT CCCCAGTATG CAACGTTGCC GCTGGACGGC
GCCCCGCTGA TCGTCGTCAC GCCGCTGACG ATTCGCGGAT GGCGCGCGAC GGACTGA
|
|---|
| Protein sequence | MTAWERDFIV HGRVARMATV DAHGHPSVVP IVYAFDDRLY TPLDAKPKRV AATQLQRVRN
IQAHPHVAIV VDHYSENWSD LAWVLIRGTA DIVTDGPMYV TGIELLRQKY PQYATLPLDG
APLIVVTPLT IRGWRATD
|
|---|
| |