Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19860 |
Symbol | |
ID | 8387313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2117706 |
End bp | 2118164 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976049 |
Product | Pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_003133831 |
Protein GI | 257055999 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03668] PPOX class probable F420-dependent enzyme, Rv0121 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00417181 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000280532 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCATGC AAGCCTCGGT GGCGCGGCGG TTGTTCGCGA CGGCGCGGGT GGCGCGGCTG GCCACCGCCG ACGCCGAGGG CGTTCCCCAC CTGGTGCCGG TGACGTTCGC GATGGACGGC GAGGACGTGG TGTCCGCCGT CGACGCCAAA CCGAAGACCA CCGCGGCGTT GCGGCGCCTG CGCAACATCA CCGCCAATCC CCGCGTGTCC GTTTTGGTGG ACCACTACGA GGAGGACTGG TCACGTCTGT GGTGGGTGCG CGCGGACGGG CATGCCACCG TCGCACACAC CGACGAGCGG GCCATCGCCG CGTTGACGGC GAAATATCCG CCTTATCTGC GTACCCCACC GGCCGGGCCG GTGGTGCGGA TACGGATCAC GACGTGGCGC GGCTGGTCGG CGTCGTCGGA TGTTCCGACT CCCGACCGGT TTGCGGGGTG TCCTCCGTAT CAGAGGTGA
|
Protein sequence | MRMQASVARR LFATARVARL ATADAEGVPH LVPVTFAMDG EDVVSAVDAK PKTTAALRRL RNITANPRVS VLVDHYEEDW SRLWWVRADG HATVAHTDER AIAALTAKYP PYLRTPPAGP VVRIRITTWR GWSASSDVPT PDRFAGCPPY QR
|
| |