Gene Svir_19860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19860 
Symbol 
ID8387313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2117706 
End bp2118164 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content69% 
IMG OID644976049 
ProductPyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003133831 
Protein GI257055999 
COG category 
COG ID 
TIGRFAM ID[TIGR03668] PPOX class probable F420-dependent enzyme, Rv0121 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00417181 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000280532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATGC AAGCCTCGGT GGCGCGGCGG TTGTTCGCGA CGGCGCGGGT GGCGCGGCTG 
GCCACCGCCG ACGCCGAGGG CGTTCCCCAC CTGGTGCCGG TGACGTTCGC GATGGACGGC
GAGGACGTGG TGTCCGCCGT CGACGCCAAA CCGAAGACCA CCGCGGCGTT GCGGCGCCTG
CGCAACATCA CCGCCAATCC CCGCGTGTCC GTTTTGGTGG ACCACTACGA GGAGGACTGG
TCACGTCTGT GGTGGGTGCG CGCGGACGGG CATGCCACCG TCGCACACAC CGACGAGCGG
GCCATCGCCG CGTTGACGGC GAAATATCCG CCTTATCTGC GTACCCCACC GGCCGGGCCG
GTGGTGCGGA TACGGATCAC GACGTGGCGC GGCTGGTCGG CGTCGTCGGA TGTTCCGACT
CCCGACCGGT TTGCGGGGTG TCCTCCGTAT CAGAGGTGA
 
Protein sequence
MRMQASVARR LFATARVARL ATADAEGVPH LVPVTFAMDG EDVVSAVDAK PKTTAALRRL 
RNITANPRVS VLVDHYEEDW SRLWWVRADG HATVAHTDER AIAALTAKYP PYLRTPPAGP
VVRIRITTWR GWSASSDVPT PDRFAGCPPY QR