Gene Namu_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2018 
Symbol 
ID8447627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2228245 
End bp2228694 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content73% 
IMG OID645041144 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003201390 
Protein GI258652234 
COG category 
COG ID 
TIGRFAM ID[TIGR03668] PPOX class probable F420-dependent enzyme, Rv0121 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000328973 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0172812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGA GCACCGACCA GGCCCGCGCC CGGTTCGCCG CGGCCCGGGT GGCGCGGTTG 
GCCACCGTGT CGGCGGCCGG CGTGCCCCAT CTGGTTCCGA TCACCTTCGC CCTCCTCGAC
GATCAGATCG TCTTCGTGGT CGACGACAAA CCCAAGCGCA CCACGCGCCT GCGCCGGATG
GACAACATCG CCGCCCAGCC GGCGGTCTGC GTGCTGGTCG ACGTCTACGA CGACGACTGG
AGCCGGTTGT GGTGGGTTCG CGCGGACGGC CGGGCCACGG TGCACGACAC CGGCACGGCC
ATCGACACCG GCGCGGCCAT TGACACCGAC CGGGCCATCG ACGCCCTGGC CGCTCGGTAC
CCGGCGTACC GGCAACGCCG CCCGCCCGGT CCGGTCGTCG CGATCGCGGT GACCCGGTGG
ACCGGCTGGG CGGCGGCCGA ATCCGGTTAG
 
Protein sequence
MRLSTDQARA RFAAARVARL ATVSAAGVPH LVPITFALLD DQIVFVVDDK PKRTTRLRRM 
DNIAAQPAVC VLVDVYDDDW SRLWWVRADG RATVHDTGTA IDTGAAIDTD RAIDALAARY
PAYRQRRPPG PVVAIAVTRW TGWAAAESG