45 homologs were found in PanDaTox collection
for query gene Franean1_3705 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3705  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
152 aa  300  4.0000000000000003e-81  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  31.54 
 
 
163 aa  72  0.000000000003  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal 
 
 
-
 
NC_008699  Noca_2812  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.76 
 
 
165 aa  68.9  0.00000000002  Nocardioides sp. JS614  Bacteria  normal  0.705928  n/a   
 
 
-
 
NC_014158  Tpau_3814  PPOX class putative F420-dependent enzyme  29.05 
 
 
165 aa  67  0.00000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0791  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.68 
 
 
165 aa  65.9  0.0000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0059  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.03 
 
 
165 aa  63.9  0.0000000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.291977 
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  30 
 
 
169 aa  62.4  0.000000002  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30 
 
 
169 aa  62.4  0.000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0501649 
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30 
 
 
169 aa  62.4  0.000000002  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_013510  Tcur_1069  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  26.32 
 
 
158 aa  60.1  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3217  PPOX class putative F420-dependent enzyme  28.08 
 
 
166 aa  58.5  0.00000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.732162  n/a   
 
 
-
 
NC_013131  Caci_2179  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.56 
 
 
151 aa  57.4  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8252  hypothetical protein  26.71 
 
 
154 aa  56.6  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.625499  decreased coverage  0.00874096 
 
 
-
 
NC_013739  Cwoe_5786  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  26.9 
 
 
155 aa  55.5  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_008942  Mlab_1007  hypothetical protein  39.39 
 
 
154 aa  55.5  0.0000003  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.596538 
 
 
-
 
NC_013124  Afer_1784  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28.97 
 
 
152 aa  55.1  0.0000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.512721  n/a   
 
 
-
 
NC_013159  Svir_38270  Pyridoxamine 5'-phosphate oxidase  31.41 
 
 
161 aa  52  0.000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2829  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.35 
 
 
159 aa  52  0.000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0474481 
 
 
-
 
NC_009921  Franean1_0582  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.93 
 
 
150 aa  51.2  0.000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1437  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.86 
 
 
150 aa  51.2  0.000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2632  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.32 
 
 
160 aa  50.4  0.000009  Salinispora tropica CNB-440  Bacteria  normal  0.224595  normal  0.27403 
 
 
-
 
NC_011769  DvMF_3004  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  29.82 
 
 
153 aa  48.1  0.00004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_7841  hypothetical protein  33.78 
 
 
139 aa  46.6  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.145006  normal 
 
 
-
 
NC_014165  Tbis_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  42.65 
 
 
141 aa  46.2  0.0002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  23.53 
 
 
146 aa  45.4  0.0003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_013441  Gbro_4095  PPOX class putative F420-dependent enzyme  33.67 
 
 
139 aa  44.7  0.0004  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1422  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.29 
 
 
133 aa  43.9  0.0008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0834851  normal  0.710342 
 
 
-
 
NC_009077  Mjls_1711  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.72 
 
 
143 aa  43.5  0.001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1732  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  33.72 
 
 
143 aa  43.5  0.001  Mycobacterium sp. MCS  Bacteria  normal  0.455039  n/a   
 
 
-
 
NC_009338  Mflv_1362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.33 
 
 
142 aa  43.5  0.001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0924624  normal  0.216406 
 
 
-
 
NC_009380  Strop_3566  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.84 
 
 
145 aa  43.1  0.001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1779  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.72 
 
 
143 aa  43.5  0.001  Mycobacterium sp. KMS  Bacteria  normal  0.0691988  normal 
 
 
-
 
NC_013235  Namu_3840  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28 
 
 
143 aa  42.4  0.002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.338101  normal  0.399447 
 
 
-
 
NC_013441  Gbro_2705  PPOX class putative F420-dependent enzyme  39.13 
 
 
143 aa  42.4  0.002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.032805  n/a   
 
 
-
 
NC_013235  Namu_4839  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35 
 
 
132 aa  42.7  0.002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1296  pyridoxamine 5'-phosphate oxidase-related FMN-binding  22.48 
 
 
157 aa  41.6  0.003  Clostridium phytofermentans ISDg  Bacteria  normal  0.474408  n/a   
 
 
-
 
NC_013739  Cwoe_2340  PPOX class putative F420-dependent enzyme  28.46 
 
 
143 aa  41.6  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  0.776273  normal  0.0697845 
 
 
-
 
NC_013757  Gobs_0315  PPOX class putative F420-dependent enzyme  30.77 
 
 
137 aa  41.2  0.005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2114  putative F420-dependent enzyme  30.34 
 
 
133 aa  41.2  0.005  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0831  putative F420-dependent enzyme  34.33 
 
 
141 aa  41.2  0.005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.981538  decreased coverage  0.00628488 
 
 
-
 
NC_013124  Afer_0695  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.68 
 
 
128 aa  41.2  0.005  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0087  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.66 
 
 
154 aa  41.2  0.005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0850  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.71 
 
 
155 aa  41.2  0.005  Caulobacter sp. K31  Bacteria  normal  0.119424  normal  0.155123 
 
 
-
 
NC_008726  Mvan_4567  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 
147 aa  40.8  0.007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.413715 
 
 
-
 
NC_011883  Ddes_1163  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.2 
 
 
157 aa  40  0.01  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  hitchhiker  0.00783233  n/a   
 
 
-
 
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