40 homologs were found in PanDaTox collection
for query gene Franean1_4261 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_4261  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
195 aa  395  1e-109  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00394974  normal  0.14161 
 
 
-
 
NC_013093  Amir_3503  pyridoxamine 5'-phosphate oxidase-related FMN- binding  72.02 
 
 
192 aa  294  7e-79  Actinosynnema mirum DSM 43827  Bacteria  normal  0.291477  n/a   
 
 
-
 
NC_013131  Caci_1361  pyridoxamine 5'-phosphate oxidase-related FMN- binding  62.43 
 
 
196 aa  225  3e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.211037  normal  0.675112 
 
 
-
 
NC_014210  Ndas_0741  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  56.08 
 
 
186 aa  199  3e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.319384  normal 
 
 
-
 
NC_013510  Tcur_1572  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  53.16 
 
 
186 aa  185  3e-46  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00978508  n/a   
 
 
-
 
NC_013235  Namu_3960  pyridoxamine 5'-phosphate oxidase-related FMN- binding  49.74 
 
 
189 aa  184  6e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.0798801 
 
 
-
 
NC_014151  Cfla_1155  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  53.65 
 
 
196 aa  182  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0091279  decreased coverage  0.0000211265 
 
 
-
 
NC_012669  Bcav_3628  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  51.08 
 
 
192 aa  180  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0476555 
 
 
-
 
NC_013131  Caci_0529  pyridoxamine 5'-phosphate oxidase-related FMN- binding  49.46 
 
 
210 aa  179  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.649622  normal  0.180326 
 
 
-
 
NC_013595  Sros_0679  hypothetical protein  50.54 
 
 
191 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1411  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  45.16 
 
 
200 aa  174  5e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1035  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  48.15 
 
 
187 aa  164  1.0000000000000001e-39  Maricaulis maris MCS10  Bacteria  normal  normal  0.0871958 
 
 
-
 
NC_007413  Ava_1936  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  45.41 
 
 
184 aa  159  3e-38  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000548178  normal 
 
 
-
 
NC_009664  Krad_2042  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.45 
 
 
180 aa  153  2e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.784819  normal 
 
 
-
 
NC_013889  TK90_1588  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  47.57 
 
 
182 aa  152  4e-36  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0573  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.93 
 
 
185 aa  149  2e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_3068  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.54 
 
 
181 aa  146  2.0000000000000003e-34  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3052  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 
181 aa  143  1e-33  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.000530481  normal  0.470012 
 
 
-
 
NC_013530  Xcel_2298  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  43.78 
 
 
180 aa  141  5e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011686  PHATRDRAFT_48645  predicted protein  39.79 
 
 
265 aa  139  1.9999999999999998e-32  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0550255  n/a   
 
 
-
 
NC_008048  Sala_2323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.25 
 
 
188 aa  138  4.999999999999999e-32  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.921013  normal  0.408441 
 
 
-
 
NC_007404  Tbd_0524  hypothetical protein  44.02 
 
 
187 aa  135  5e-31  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.266179  normal 
 
 
-
 
NC_011901  Tgr7_1154  pyridoxamine 5'-phosphate oxidase-related FMN-binding  44.32 
 
 
187 aa  134  9.999999999999999e-31  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3482  hypothetical protein  38.42 
 
 
183 aa  130  1.0000000000000001e-29  Saccharophagus degradans 2-40  Bacteria  normal  0.083045  normal  0.0446911 
 
 
-
 
NC_009952  Dshi_1292  pyridoxamine 5'-phosphate oxidase-related FMN-binding  41.3 
 
 
182 aa  124  7e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.632412  normal  0.491958 
 
 
-
 
NC_013037  Dfer_1188  pyridoxamine 5'-phosphate oxidase-related FMN- binding  41.53 
 
 
188 aa  122  2e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.765016  normal  0.250366 
 
 
-
 
NC_007802  Jann_0324  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.01 
 
 
182 aa  120  9.999999999999999e-27  Jannaschia sp. CCS1  Bacteria  normal  normal  0.644336 
 
 
-
 
NC_009719  Plav_1990  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.59 
 
 
182 aa  120  9.999999999999999e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1462  hypothetical protein  34.97 
 
 
184 aa  115  3e-25  Colwellia psychrerythraea 34H  Bacteria  normal  0.684436  n/a   
 
 
-
 
NC_010506  Swoo_4036  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.97 
 
 
191 aa  115  3.9999999999999997e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
BN001308  ANIA_10099  pyridoxamine phosphate oxidase family protein (AFU_orthologue; AFUA_6G11440)  35.75 
 
 
251 aa  115  3.9999999999999997e-25  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0300362  normal 
 
 
-
 
NC_013124  Afer_1160  pyridoxamine 5'-phosphate oxidase-related FMN- binding  34.95 
 
 
185 aa  103  1e-21  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.990082  n/a   
 
 
-
 
NC_008825  Mpe_A3061  hypothetical protein  33.62 
 
 
218 aa  50.1  0.00002  Methylibium petroleiphilum PM1  Bacteria  normal  0.0293748  normal  0.740909 
 
 
-
 
NC_007948  Bpro_0276  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.59 
 
 
207 aa  46.2  0.0003  Polaromonas sp. JS666  Bacteria  normal  0.435277  normal 
 
 
-
 
NC_011004  Rpal_1920  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 
206 aa  43.5  0.002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.392455  n/a   
 
 
-
 
NC_013757  Gobs_0075  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  26.13 
 
 
220 aa  43.5  0.002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2217  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.43 
 
 
210 aa  42.4  0.004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.529207  normal  0.605811 
 
 
-
 
NC_009719  Plav_1385  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.79 
 
 
203 aa  42  0.005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.814858  normal 
 
 
-
 
NC_007298  Daro_1523  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.16 
 
 
205 aa  42  0.006  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5836  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.62 
 
 
220 aa  41.6  0.008  Delftia acidovorans SPH-1  Bacteria  normal  0.089044  normal 
 
 
-
 
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