Gene Sde_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3482 
Symbol 
ID3966324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp4436341 
End bp4436892 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID637922579 
Producthypothetical protein 
Protein accessionYP_528949 
Protein GI90023122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.083045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0446911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGC AATATCAAGA AATTCTAGAA AAGCATAAAA CATTCATTGA AGCGCAAAAA 
ATATTTTTTG TAGGTACGGC CACCGAAGAC AGCCGCGTAA ACATCTCGCC CAAAGGCATG 
GATAGCTTTC GGGTGTTGGG TGGCAATAGG GTAATTTGGC TAAACGTAAC GGGTAGCGGA 
AATGAAACTG CAGCCCATGT GCAGCGTTGC CCGCGTATGA CAGTTATGTT TTCTGCGTTT 
GAGGGCAAGC CCGTTATTAT GCGTTTATAT GGTACAGCAA AAGTTATTCA TAAAAACGAC 
AGTGAATGGA GCGAGTTATA CAGCAAATTC GAGCCGATTG CCGGAGCCAG ACAAATATTT 
GATATGCAGG TAGAAATGCT GCAAACATCT TGCGGTATGG CTGTACCTTA TTTCGAATAT 
GTGGGCGAGC GCGAATTGCT TAGGGATTGG GCCGTGAAGC AAGGTGACGA AGGCCTAAAG 
AAATATTGGG CGAAAAAAAA CCAGGCAACG ATAGATGGCT TATCAACAAG CATTGTAGAG 
CTTAACACCT AG
 
Protein sequence
MGQQYQEILE KHKTFIEAQK IFFVGTATED SRVNISPKGM DSFRVLGGNR VIWLNVTGSG 
NETAAHVQRC PRMTVMFSAF EGKPVIMRLY GTAKVIHKND SEWSELYSKF EPIAGARQIF 
DMQVEMLQTS CGMAVPYFEY VGERELLRDW AVKQGDEGLK KYWAKKNQAT IDGLSTSIVE 
LNT