32 homologs were found in PanDaTox collection
for query gene Sde_3482 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3482  hypothetical protein  100 
 
 
183 aa  385  1e-106  Saccharophagus degradans 2-40  Bacteria  normal  0.083045  normal  0.0446911 
 
 
-
 
NC_013037  Dfer_1188  pyridoxamine 5'-phosphate oxidase-related FMN- binding  58.47 
 
 
188 aa  230  7.000000000000001e-60  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.765016  normal  0.250366 
 
 
-
 
NC_013530  Xcel_2298  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  57.3 
 
 
180 aa  224  5.0000000000000005e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4036  pyridoxamine 5'-phosphate oxidase-related FMN-binding  52.22 
 
 
191 aa  215  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1292  pyridoxamine 5'-phosphate oxidase-related FMN-binding  52.25 
 
 
182 aa  214  7e-55  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.632412  normal  0.491958 
 
 
-
 
NC_003910  CPS_1462  hypothetical protein  53.33 
 
 
184 aa  211  4.9999999999999996e-54  Colwellia psychrerythraea 34H  Bacteria  normal  0.684436  n/a   
 
 
-
 
NC_007404  Tbd_0524  hypothetical protein  46.67 
 
 
187 aa  193  1e-48  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.266179  normal 
 
 
-
 
NC_013161  Cyan8802_3052  pyridoxamine 5'-phosphate oxidase-related FMN-binding  47.22 
 
 
181 aa  192  2e-48  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.000530481  normal  0.470012 
 
 
-
 
NC_011726  PCC8801_3068  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.67 
 
 
181 aa  189  2e-47  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1936  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  47.54 
 
 
184 aa  188  4e-47  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000548178  normal 
 
 
-
 
NC_009719  Plav_1990  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.7 
 
 
182 aa  178  2.9999999999999997e-44  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0324  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  47.62 
 
 
182 aa  175  3e-43  Jannaschia sp. CCS1  Bacteria  normal  normal  0.644336 
 
 
-
 
NC_011901  Tgr7_1154  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.05 
 
 
187 aa  173  9.999999999999999e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1588  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  44.44 
 
 
182 aa  171  5e-42  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0573  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.78 
 
 
185 aa  156  2e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1572  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  42.37 
 
 
186 aa  147  6e-35  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00978508  n/a   
 
 
-
 
NC_008048  Sala_2323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  43.33 
 
 
188 aa  147  8e-35  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.921013  normal  0.408441 
 
 
-
 
NC_013595  Sros_0679  hypothetical protein  39.77 
 
 
191 aa  142  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1361  pyridoxamine 5'-phosphate oxidase-related FMN- binding  41.62 
 
 
196 aa  141  4e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.211037  normal  0.675112 
 
 
-
 
NC_008347  Mmar10_1035  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.34 
 
 
187 aa  142  4e-33  Maricaulis maris MCS10  Bacteria  normal  normal  0.0871958 
 
 
-
 
NC_013235  Namu_3960  pyridoxamine 5'-phosphate oxidase-related FMN- binding  39.89 
 
 
189 aa  137  7e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.0798801 
 
 
-
 
NC_012669  Bcav_3628  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  38.3 
 
 
192 aa  134  7.000000000000001e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0476555 
 
 
-
 
NC_013947  Snas_1411  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  37.78 
 
 
200 aa  130  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2042  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.42 
 
 
180 aa  130  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.784819  normal 
 
 
-
 
NC_009921  Franean1_4261  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.01 
 
 
195 aa  127  8.000000000000001e-29  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00394974  normal  0.14161 
 
 
-
 
NC_014210  Ndas_0741  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  37.22 
 
 
186 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.319384  normal 
 
 
-
 
NC_013093  Amir_3503  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.7 
 
 
192 aa  125  3e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.291477  n/a   
 
 
-
 
NC_014151  Cfla_1155  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  38.67 
 
 
196 aa  125  5e-28  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0091279  decreased coverage  0.0000211265 
 
 
-
 
NC_013131  Caci_0529  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.99 
 
 
210 aa  120  9e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.649622  normal  0.180326 
 
 
-
 
NC_011686  PHATRDRAFT_48645  predicted protein  38.25 
 
 
265 aa  118  6e-26  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0550255  n/a   
 
 
-
 
BN001308  ANIA_10099  pyridoxamine phosphate oxidase family protein (AFU_orthologue; AFUA_6G11440)  34.36 
 
 
251 aa  108  5e-23  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0300362  normal 
 
 
-
 
NC_013124  Afer_1160  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.85 
 
 
185 aa  107  9.000000000000001e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.990082  n/a   
 
 
-
 
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