Gene Sala_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2323 
Symbol 
ID4080608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2451375 
End bp2451941 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content64% 
IMG OID638010703 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_617365 
Protein GI103487804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.921013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.408441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAT TCACCGACAC GCTGACCGAC AAACATATCG CCTTCATCGA AAAGCAGCCG 
GTCTTCTTCA CCGCGACCGC CGCGCGCGAC GGCCGCATCA ACCTGTCGCC CAAGGGTTAT
GCCGACAGTT TCAGGATATT GTCCGAACGG CAGGTCGCCT ATCTCGACCT CGGCGGGTCG
GGCAACGAAA CCCACGCACA TCTGGCCGCG GACGGCCGAA TCACCATCAT GTTCTGCGCC
TTCGACCGCA GTGCGCTGAT CCTGCGCATT TACGGCCACG GCCACCCCGT GCTGCCGCAG
GATGCCGAGT GGGACGCACT CGCGGCGCAT TTCACCCTGC TCCCCGGTAC GCGCCAGATT
TTCGTGATCG ACGTCGACAG CGTGCAGACG AGCTGCGGCT GGGGCGTACC GATGATGGAA
TTGCAAGGCG AGCGCGAGAC GCTGCAGAAA TATCACCGGC AGGCCGATCC CGCGCTGTGG
GTCGAGAAGT TTCAGGAGCG CACGAAAAGC ATCGACGGCC TGCCGACGCG CCCGACCGAC
CGCTTCATCG CCGGGGAAAC CGCCTGA
 
Protein sequence
MAEFTDTLTD KHIAFIEKQP VFFTATAARD GRINLSPKGY ADSFRILSER QVAYLDLGGS 
GNETHAHLAA DGRITIMFCA FDRSALILRI YGHGHPVLPQ DAEWDALAAH FTLLPGTRQI
FVIDVDSVQT SCGWGVPMME LQGERETLQK YHRQADPALW VEKFQERTKS IDGLPTRPTD
RFIAGETA