Gene Ava_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1936 
Symbol 
ID3681655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2406729 
End bp2407283 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content42% 
IMG OID637717277 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_322453 
Protein GI75908157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000548178 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG TTTTTGACCA CATCACCAAA GAATTACAAG AATTTATTGC AGCCCAACAC 
CTGTTTTTTG TAGCTTCTGC ACCCCTGAGT CCTGATGGCC ATGTGAATAT GTCTCCCAAA
GGACTAGACT GCTTTCGGAT TCTTTCCCCT CATCAGGTAG CTTACCTAGA TTTAACAGGT
AGTGGTAATG AAACCTCAGC CCATCTCCAA GAAAACGGGC GAATCACCTT AATGTTTTGC
GCTTTTGAAG GAGCGCCTCT AATTTTACGC CTCTATGGAA AAGGAGAGAC AATTTTACCC
AGTTCCCCTA ATTGGGATTC CTTGTACTCA TTATTTCCTC CAATCCCTGG AACTCGGCAA
ATTATAGTTG CAGATATCGA ACGTGTGCAA ACTTCTTGTG GTCTTGGTGT CCCACTGTAT
GAATATCAAG GACAAAGACA GGCTTTAGTT GATTGGGCAG AGAAAAAAGG AGTACAAGGA
GTTAATGACT ATCGAAAGCA AAAAAATGTT GTGAGTATCG ATGGTTTACC GACTCCACTC
AGCAAATTAT TTTAA
 
Protein sequence
MAKVFDHITK ELQEFIAAQH LFFVASAPLS PDGHVNMSPK GLDCFRILSP HQVAYLDLTG 
SGNETSAHLQ ENGRITLMFC AFEGAPLILR LYGKGETILP SSPNWDSLYS LFPPIPGTRQ
IIVADIERVQ TSCGLGVPLY EYQGQRQALV DWAEKKGVQG VNDYRKQKNV VSIDGLPTPL
SKLF