Gene Plav_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1990 
Symbol 
ID5456401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2173490 
End bp2174038 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID640877566 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001413261 
Protein GI154252437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC AGTTCCCGAG CCTCACACCC GAACTCAAGG ATTTCATCGG GCGTCAGCAC 
ATCTTCTTCA CGGCGTCTGC CACGGCGGAC AGCCGCATCA ACCTCTCGCC CAAGGGGCTC
GATGCGCTGC GCGTGACCGG CGACAATGAA GTCGTCTATC TCGATCATAC CGGCAGCGGC
AACGAAGCGG CGGCGCATCT CAAAGCCGAT GGCCGCCTCA CCATCATGCT CTGCGCCTTT
GCGGGCCCGC CGATGATCCT GCGCCTCTAT GGACGCGGCC GCATCGCCCG CAAGGGCACG
GATGAATACC GGCGCCATCT CGCTTCCGCC TTCGCGGGAA ATGAACCCAC GGGCGCACGT
CAGATCGTCA TCCTCGACAT CGACCTCGTG CAAACCTCCT GCGGCTACGG CGTTCCCCTC
CACGACTACA AGGCCGAACG CCCCTCGCTG ACCAACTGGG CGGACGCTCA GGGCGAGCAG
GGCATCGCGG ATTACTGGCA GAAAAAGAAC CGGGTAAGCA TCGACGGCTT GCCGACAGGA
GTGGAATGA
 
Protein sequence
MAKQFPSLTP ELKDFIGRQH IFFTASATAD SRINLSPKGL DALRVTGDNE VVYLDHTGSG 
NEAAAHLKAD GRLTIMLCAF AGPPMILRLY GRGRIARKGT DEYRRHLASA FAGNEPTGAR
QIVILDIDLV QTSCGYGVPL HDYKAERPSL TNWADAQGEQ GIADYWQKKN RVSIDGLPTG
VE