Gene Dfer_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1188 
Symbol 
ID8224759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp1412091 
End bp1412657 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content58% 
IMG OID644929050 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003085602 
Protein GI255034981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.765016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.250366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGC AGCTGGACCA CATCACCCCC GATTTGCAGG CGTTCATCGA GGCGCAGAAA 
ATCTACTTTG TAGCCACGGC AGCCGAAACC GGCACCGTAA ACCTCTCGCC AAAGGGAATG 
GACTCGTTCC GCATCCTCGG TCCGAACCGC GTGATGTGGC TGAATGTGAC CGGCAGCGGA 
AACGAAACGG CGGCCCATTT GCTCCTCCAC GACCGCATTA CCGTCATGTT TTGCGCATTC 
GAGGGCAAGC CGCTGATCCT GCGGCTGTAC GGGCATGGCA AAGTTTACCA CCCCGCCGAC 
GCCGAATGGA CAGAATACGC CCCGCTGTTT CCACCGCTCG AAGGCGCGCG ACAGCTGGTC 
GATATCCGGG TGGATCTCGT ACAAACTTCC TGCGGCATGG CCGTGCCGTT CATGGATTAC 
AACCGCGAAC GGACAGAGCT AAACGCCTGG GCGCACAAAC AGGGGCCTAC CGGCATCCAA 
AACTACTGGG CGCGCAAAAA TGTAACCAGT ATCGACGGCT TCGAAACCGG CATTTTCGCT 
TCCAACAGCG CGAGACAGGC AGAATAG
 
Protein sequence
MGKQLDHITP DLQAFIEAQK IYFVATAAET GTVNLSPKGM DSFRILGPNR VMWLNVTGSG 
NETAAHLLLH DRITVMFCAF EGKPLILRLY GHGKVYHPAD AEWTEYAPLF PPLEGARQLV 
DIRVDLVQTS CGMAVPFMDY NRERTELNAW AHKQGPTGIQ NYWARKNVTS IDGFETGIFA 
SNSARQAE