| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5836 |
|---|
| Symbol | |
|---|
| ID | 5751457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6491948 |
|---|
| End bp | 6492610 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300968 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001566849 |
|---|
| Protein GI | 160901267 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.089044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACAG ACAACACCGC CCTTGCAGAG TCGCCAGGCC CGGCCATCGA CCTGGATTCG
CTCTACGCCG CCCCGGCAGA AAGAATCCAG AAGGCCGTGC GCGACCGCCT GTCCGACTTC
CACGAGGCCT ATCTGCGCCA GGCCAGCTTC TTTTGCCTGG CCACGGCCGG CGAACGCGGC
CTGGACGCCT CGCCGCGCGG CGGGCCCCCC GGCTTTGTGC AGGTGCTGGA CGAGCGCACC
GTGGCCTTTG CCGACTGGCC CGGCAACAAC CGCATCGAAT CCCTGCGCAA CCTGCAGGCC
GATGACCGCC TGGCCCTGCT CTTCCTGTTC CCGGGGCTGG ACATCTTCCT GCGCATCAAC
GGGCGCGGCC GCATCTCCAC CGACCCCCAT CTGCTGCAGG AGCTGAGCGA AGGCCGGGGC
ACGCCCAAGA CCGCCACCGT GGTCCTGGTC GACGAGGTGC TGCTGCACTG CGGCAAGGCC
ATCCACCGCT CCGGCCTCTG GAACCCGTCA AGCCAGCTGG ACCGCTCCGC CCTGCCCACC
GTGGGCCAGA TGATGGCCGC CCTCACGCAG TTGGCCGACG CCACGGCGCC CGCCATGGAT
GCCGCGCAAC AGGAGCAGGC CAACGCCCAC TACGCCCATG CGGTCAGGCA CGACCTGTAC
TGA
|
|---|
| Protein sequence | MHTDNTALAE SPGPAIDLDS LYAAPAERIQ KAVRDRLSDF HEAYLRQASF FCLATAGERG
LDASPRGGPP GFVQVLDERT VAFADWPGNN RIESLRNLQA DDRLALLFLF PGLDIFLRIN
GRGRISTDPH LLQELSEGRG TPKTATVVLV DEVLLHCGKA IHRSGLWNPS SQLDRSALPT
VGQMMAALTQ LADATAPAMD AAQQEQANAH YAHAVRHDLY
|
|---|
| |