14 homologs were found in PanDaTox collection
for query gene EcSMS35_0301 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010498  EcSMS35_0301  hypothetical protein  100 
 
 		 387 aa  786    Escherichia coli SMS-3-5  Bacteria  normal  0.0705452  decreased coverage  0.00000593331 
 
 
-
 
NC_009665  Shew185_3244  response regulator receiver protein  29.82 
 
 		 386 aa  163  4.0000000000000004e-39  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2203  hypothetical protein  25.23 
 
 		 696 aa  78.2  0.0000000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.161462 
 
 
-
 
NC_008752  Aave_0400  ymc-like protein  24.27 
 
 		 235 aa  73.6  0.000000000006  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011370  Rleg2_6154  response regulator receiver protein  31.06 
 
 		 414 aa  62.4  0.00000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_1763  hypothetical protein  23.79 
 
 		 593 aa  59.3  0.0000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014148  Plim_1101  purine or other phosphorylase family 1  29.29 
 
 		 411 aa  56.6  0.0000007  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A0542  response regulator receiver domain-containing protein  28.23 
 
 		 403 aa  52.4  0.00002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4627  response regulator receiver protein  29.5 
 
 		 415 aa  50.1  0.00006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.485266  n/a   
 
 
-
 
NC_008543  Bcen2424_3737  response regulator receiver protein  29.5 
 
 		 415 aa  50.1  0.00006  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00211748  normal  0.0198866 
 
 
-
 
NC_009622  Smed_6520  response regulator receiver protein  24.81 
 
 		 406 aa  49.3  0.0001  Sinorhizobium medicae WSM419  Bacteria  normal  0.143497  normal  0.120873 
 
 
-
 
NC_007760  Adeh_0563  response regulator receiver domain-containing protein  26.87 
 
 		 407 aa  44.3  0.004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4156  two component transcriptional regulator  29.13 
 
 		 232 aa  44.3  0.004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000307056  n/a   
 
 
-
 
NC_008347  Mmar10_1990  protein of unknown function DUF900, hydrolase family protein  22.28 
 
 		 372 aa  42.7  0.01  Maricaulis maris MCS10  Bacteria  normal  0.972188  normal  1 
 
 
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