| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3244 |
|---|
| Symbol | |
|---|
| ID | 5372210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3880746 |
|---|
| End bp | 3881906 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640831494 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001367434 |
|---|
| Protein GI | 153001753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATT TTTTAGTAAT TGAAGATAAT GAATCTAAAT TTAAGCAGAT AGATAGTTTG
CTGAAAAAAA GAGTGGGAAG TGTATTTGTT AAGCGGGTTA TGTCCGTTGA TTCAGGTATT
GAACAACTTA AAACTAGACA ATATAGTTTT GTTATTTTGG ATTTAAACTT ACCATTAATG
GAAGATGGAA AGGCTGTAAC TGATGGAGGG ATTAAACTAT TAAAGTGGAT AAAGATTAAT
CAAAAAAAAA GGAAATGCAA AGTACCTAGC AACATTATAG GTTTAACTGA GTTTCCTAAC
TTAATTGAAG AATTCTCATC CGAATTAAAT TCATGTAGGG TGTTTGCATA TGAATATAAA
CTAAATGATG AAGGTTGGAA AAATCAATTA ACAGAGTGCA TAAAAGAGTA TTCTTTAAAA
CTTGACCAAG AAATGGTTAA AGTTGCTACA AAGAAAATTA TTTATTCTGT ACATGGAATA
GAAACTAATG GTGAATGGCA AAAAGAGTTA TCGAAAAATC TCAACCTAGA CAGCAATGAA
TATATACACA TACCACATGA ATATAATTTT TTTCCTTTAC TTTCATTTCT AATTCCTCCT
TTGAGATGGA TTGAAGTTAG AAGGTTTAAA AAAGAGTTGG AATTTATGGC TGAAAAACAT
CCAGGTTGTT GTATAACGCT AATCGGTCAT AGTTTCGGAA CATACTTGAT AGCTAAGTCT
CTTAAGAATA TTTCACAAAC CTCAACTCCA TATTTTGACC GTATAATCTT ATGCGGTAGT
GTTTTAAAAG CTAGTTATGA TTGGGATGAA ATAATTCGTA GACACAATAT TAAAAGCATT
TTAAATGATT GCGCACTTAA TGATAGACCG TTAGTTATGA GTCAAGCATT TGCTGTTGGT
TTAGGAATGG CTGGTAGGGT AGGTTTTAAA AGAAAACATG GACAATTAAT CGAAAATAGA
TTTTTTAATG GAGGGCATAG TGATTTTTTT AATTCTCAAG TATTTGGTCA CTGGGAAAGA
TTTATCAAGA AAGGGGATGT TGTAAAAGTT AATCAAAAGC AACCTGTTAC AATTATTGAT
AGTTTATGCG AGACAATAAT CTTATACAGT CCTTGGATTA TTTTCATAAT TTTGATTTTA
TCGATTTGTT ATTACTATTA A
|
|---|
| Protein sequence | MIDFLVIEDN ESKFKQIDSL LKKRVGSVFV KRVMSVDSGI EQLKTRQYSF VILDLNLPLM
EDGKAVTDGG IKLLKWIKIN QKKRKCKVPS NIIGLTEFPN LIEEFSSELN SCRVFAYEYK
LNDEGWKNQL TECIKEYSLK LDQEMVKVAT KKIIYSVHGI ETNGEWQKEL SKNLNLDSNE
YIHIPHEYNF FPLLSFLIPP LRWIEVRRFK KELEFMAEKH PGCCITLIGH SFGTYLIAKS
LKNISQTSTP YFDRIILCGS VLKASYDWDE IIRRHNIKSI LNDCALNDRP LVMSQAFAVG
LGMAGRVGFK RKHGQLIENR FFNGGHSDFF NSQVFGHWER FIKKGDVVKV NQKQPVTIID
SLCETIILYS PWIIFIILIL SICYYY
|
|---|
| |