Gene Bcen2424_3737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3737 
Symbol 
ID4453766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp590762 
End bp592009 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content47% 
IMG OID639695796 
Productresponse regulator receiver protein 
Protein accessionYP_837368 
Protein GI116691835 
COG category[F] Nucleotide transport and metabolism
[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0775] Nucleoside phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00211748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0198866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGA TTCTTATTGT TGAAGATGAA ACAGAAAAAC GCCGCCTACT CATCGAAACA 
CTGATAGAAG TAGAGGGCGT GGCCCTGGAT CAAATAACCT ATGTTGACGA TGCGCTATCA
GCAAAGAAAC AGATTTCGGC GAGAAGATTT GATCTTCTTA TTTTAGATAT AAATATCCCG
CCCCGGGCGG ACAAACCGAC GGAGACTGGG GCCGGCCTAG AGGTCATGAG TTTCGTGCGG
AACAATAACA ACGCAATACC GCCGGGATGC ATCATAGGAA TGACAGCATA CGATGACGGA
GCCGAGGCCG CTGAAGAAGT TTTTGCGTCT CCGTTATGGA AACTCGTCAG ATTTTCCTAT
TCGGAACTGG GATGGCAAGC TCATCTTAAA GAGGCCGTCC GCTATATGAT CAACATGCAG
CGGCCACCTT ATTCGAACGA TGGTCAAACA TATCATGTTG ACCTTGGTAT TGTCGTCGCA
CTGGAAGATG AAGAGCTTAA GAGTATATTA GCTCTACCAG CAGATTGGAA AGAACTTCCA
GTAAACTATG ATCATAGTCG ATATTTTTCA GGTAATTTTT CAAATGGCAA TTGTCAGATA
AGCGTTATCG CAGTAGCGGC GCCTAAAATG GGGATGCCGG CGGCCGCAGT TGCAGCCTCA
AAACTTATCC AGTCCTTTCG ACCACGGCTT TTAGCAATGA GCGGAATCTG TGCAGGAGTG
AAAGGAAAGG TGGAGATCGG AGATATTTTG ATCGCGGACC CCTGTTTTGA CTGGGGCAGT
GGCAAGTGGG TTCGTGAAAC ACCGGAGTCC GAACTCAAAT TTCGGCCTGC ACCGTATCCG
TGGCGCCTTG ACGAGGGACT TCGCGGGATT GTTAAACGAC TTGACAACGA AGAATGGCTA
AAAGCTGTTT ATCGAGACTT TGATGGAAAG CAGGTCGTTG ATCGAGCACC TAAAGTGCTC
GTCGAGGCGA TGGCGAGTGG AGCATCAGTG CTACAAGCAG CATCACTTAT GGATGACGTC
AAAGATCAAC ACAAGAATTT AGTCGGCGTA GAAATGGAAA CTTATGCAGT TTTTACTGCC
GCACAATATG CATCAGAACC ACGACCAAAA TGCATATCAA TAAAATCCGT TTGCGATTTC
GGAGATGAAG ACAAAAAAGA TGGAGCTCAT TTGTATGCCG CATATACTAG TGCACGGTTC
CTGTATCGAT TTGCAATTGG AGCCCTGGGC GATCAAAATT TTCAGTGA
 
Protein sequence
MIKILIVEDE TEKRRLLIET LIEVEGVALD QITYVDDALS AKKQISARRF DLLILDINIP 
PRADKPTETG AGLEVMSFVR NNNNAIPPGC IIGMTAYDDG AEAAEEVFAS PLWKLVRFSY
SELGWQAHLK EAVRYMINMQ RPPYSNDGQT YHVDLGIVVA LEDEELKSIL ALPADWKELP
VNYDHSRYFS GNFSNGNCQI SVIAVAAPKM GMPAAAVAAS KLIQSFRPRL LAMSGICAGV
KGKVEIGDIL IADPCFDWGS GKWVRETPES ELKFRPAPYP WRLDEGLRGI VKRLDNEEWL
KAVYRDFDGK QVVDRAPKVL VEAMASGASV LQAASLMDDV KDQHKNLVGV EMETYAVFTA
AQYASEPRPK CISIKSVCDF GDEDKKDGAH LYAAYTSARF LYRFAIGALG DQNFQ