12 homologs were found in PanDaTox collection
for query gene Dshi_3158 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_3158  TRAP transporter-DctQ subunit putative  100 
 
 		 165 aa  318  1.9999999999999998e-86  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0646  tripartite ATP-independent periplasmic transporter DctQ  34.88 
 
 		 170 aa  82.4  0.000000000000002  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.167752 
 
 
-
 
NC_007494  RSP_3452  TRAP-T family transporter small inner membrane subunit  28.57 
 
 		 206 aa  45.8  0.0002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.159409  n/a   
 
 
-
 
NC_009050  Rsph17029_3097  tripartite ATP-independent periplasmic transporter DctQ  28.57 
 
 		 206 aa  46.2  0.0002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.739132  normal  0.502747 
 
 
-
 
NC_011004  Rpal_5035  Tripartite ATP-independent periplasmic transporter DctQ component  41.56 
 
 		 183 aa  45.8  0.0002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_007958  RPD_0610  tripartite ATP-independent periplasmic transporter DctQ  34.06 
 
 		 184 aa  45.4  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.809519  normal  1 
 
 
-
 
NC_007948  Bpro_4737  tripartite ATP-independent periplasmic transporter DctQ  28.97 
 
 		 172 aa  45.1  0.0004  Polaromonas sp. JS666  Bacteria  normal  0.222644  normal  0.72371 
 
 
-
 
NC_008738  Maqu_4183  hypothetical protein  23.17 
 
 		 441 aa  42  0.004  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_2910  tripartite ATP-independent periplasmic transporter DctQ  26.54 
 
 		 230 aa  41.6  0.005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.293027  normal  1 
 
 
-
 
NC_008751  Dvul_2258  tripartite ATP-independent periplasmic transporter DctQ  30.3 
 
 		 156 aa  40.8  0.008  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2903  hypothetical protein  25.69 
 
 		 182 aa  40.8  0.009  Chelativorans sp. BNC1  Bacteria  normal  0.700783  n/a   
 
 
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NC_008786  Veis_2882  tripartite ATP-independent periplasmic transporter DctQ  25.62 
 
 		 204 aa  40.4  0.01  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.0770151 
 
 
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