| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5035 |
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| Symbol | |
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| ID | 6412729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5417458 |
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| End bp | 5418009 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714920 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_001993999 |
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| Protein GI | 192293394 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGAG CCAGTGCCGC TCTTGCCGCG CTCGAACGAG CGCTGACGCT GATCGCCGTC
ACTTTCATGT TCGCGATCAT GGTGCTGGTC GTGGCGGACG TGTTCATGCG CTACGCGCTG
AACCGTCCGT TCTCCTTCAC CTACGATCTG ATCGGCCTGT ATCTGATGGC GGGCGTGTTC
TTCCTGACGC TGTCGGATGC GCTGCGCGAG CACGTCCATG TCGGCGTCGA CATTCTGGTG
CCGCGGTTCT CGCCGGCGGG GCGGCGCCTC GCCGAGATCA TCACCGCACT GACCGGCCTG
TTCGTGTTCG TGCTGCTGTG CAAGGTCGGC TTCGACCGCG CGCTCGACAA TTTCCAGCAG
AATGACGTGC TCGCCGGCGC GATCCCGTGG CCGACCTGGA TCTCGGCGGC GTTGGTGCCG
TTTGGCTGCG GCGTGCTGGT GCTGCGGCTG CTGCTGATGC TCGCGGGCCA TGTGGCGAGC
CTCGTCACCG GCCGTGACCT CTACCCGTTG CCGCCCCTGG TCGGGGTCGG TGAAGCCAAG
TCCTTCGAAT AA
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| Protein sequence | MQRASAALAA LERALTLIAV TFMFAIMVLV VADVFMRYAL NRPFSFTYDL IGLYLMAGVF
FLTLSDALRE HVHVGVDILV PRFSPAGRRL AEIITALTGL FVFVLLCKVG FDRALDNFQQ
NDVLAGAIPW PTWISAALVP FGCGVLVLRL LLMLAGHVAS LVTGRDLYPL PPLVGVGEAK
SFE
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