| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0646 |
|---|
| Symbol | |
|---|
| ID | 5368014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 704713 |
|---|
| End bp | 705225 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640802982 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_001339515 |
|---|
| Protein GI | 152994680 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.167752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGAGATA CGATGTCTTT TATTTCCAAT GTATTTGATC GATTGATACG AGCTATTTTC
TATATCGGGG TTATTTCCGG CGGCATTATG GCTGCCTTAA TACTTGTTAG TTCGTTACTT
CGCTATGTCG TAGGGACGCC TATTTCGTTT TCTGATGAGT TGGCAGGTCT GCTCTTTGTT
ACTTTGGCTT TTACTACCTT TCCTTTGGTA ATGGAGCGTT CAGAACATAT ACAGCTGTCA
ATACTAACTG AAAGGTTAAA TCATGGCACT CAGCGTGTCT GTCGTATATT CGCTTCATTA
ATTTTGTTTA CTTTCGCAAC TGTTTTCATT TATCAGTCTT GGGCGTTCAT GGATTTTTCT
CGCATGATTA CATCACGAAC GGATGTCAGC GGCATTCTAC TTTGGCCTTG GATGGCTTTA
ATGCCTATAT CAATGGGGCT TTGTATTCTG GTTGAGCTAC GGGCTATTTT CCGAATTGTT
ACTGATAGCC CTATTTCGGA GCATTCACTA TGA
|
|---|
| Protein sequence | MGDTMSFISN VFDRLIRAIF YIGVISGGIM AALILVSSLL RYVVGTPISF SDELAGLLFV
TLAFTTFPLV MERSEHIQLS ILTERLNHGT QRVCRIFASL ILFTFATVFI YQSWAFMDFS
RMITSRTDVS GILLWPWMAL MPISMGLCIL VELRAIFRIV TDSPISEHSL
|
|---|
| |