| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0610 |
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| Symbol | |
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| ID | 4021079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 690069 |
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| End bp | 690623 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960798 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_567749 |
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| Protein GI | 91975090 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.809519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAGC GGGCAGGCGC TATTCTCGCC GCGATCGAAC GTGCCTTGAC GGTCGTCGCG
GTCGTGTTCC TCTTTGTGAT CATGGTGCTC GTGGTCGCGG ACGTATTCAT GCGCTACGCG
CTGAATCGCC CGTTCTCCTT CACCTACGAT CTGATCGGCC TGTATCTGAT GGCCGGCGTA
TTCTTCCTGA CGCTGTCGGA CGCGCTGCGC GAGCACGTCC ATGTCGGCGT CGACATTCTG
GTGCCGCGCT TTTCGCCGGC GGGCCGGAGA CTGGCGGAGA TTGTCACGGC ATTCACCGGG
CTATTCGTGT TCGTCCTGCT CTGCAAGGTC GGCTTCGACC GCGCGGTCGA GAATTTCGAA
CAGAAAGACG TGCTCGCCGG CGCCATTCCC TGGCCGACCT GGATTTCTGC GGCGCTGGTG
CCGCTCGGCT GCGGCGTGCT GGTGCTGCGG CTGGTGCTGC AGCTGGTCGG CCACGCGCTT
AGTCTGGTGA CCGGCCGCAA TTTCTATCCG CTGCCGCCCC TCGTCGGGGT CGGCGAAGCC
AAATCCTACG AATAG
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| Protein sequence | MIKRAGAILA AIERALTVVA VVFLFVIMVL VVADVFMRYA LNRPFSFTYD LIGLYLMAGV
FFLTLSDALR EHVHVGVDIL VPRFSPAGRR LAEIVTAFTG LFVFVLLCKV GFDRAVENFE
QKDVLAGAIP WPTWISAALV PLGCGVLVLR LVLQLVGHAL SLVTGRNFYP LPPLVGVGEA
KSYE
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