9 homologs were found in PanDaTox collection
for query gene Dfer_4201 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_4201  hypothetical protein  100 
 
 
646 aa  1304    Dyadobacter fermentans DSM 18053  Bacteria  normal  0.679676  normal 
 
 
-
 
NC_010552  BamMC406_5326  hypothetical protein  32.58 
 
 
644 aa  335  1e-90  Burkholderia ambifaria MC40-6  Bacteria  normal  0.260741  normal 
 
 
-
 
NC_011901  Tgr7_2939  hypothetical protein  24.69 
 
 
631 aa  82  0.00000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009957  Dshi_3986  hypothetical protein  22.87 
 
 
634 aa  60.5  0.00000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.946958  n/a   
 
 
-
 
NC_009719  Plav_2049  hypothetical protein  22.97 
 
 
631 aa  60.5  0.0000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.977561  hitchhiker  0.00020723 
 
 
-
 
NC_007355  Mbar_A3545  hypothetical protein  23.74 
 
 
662 aa  53.5  0.00001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.011877  normal 
 
 
-
 
NC_012917  PC1_0719  hypothetical protein  22.41 
 
 
641 aa  47.4  0.0009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3055  hypothetical protein  24.84 
 
 
655 aa  46.6  0.002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0206924  hitchhiker  0.00000001021 
 
 
-
 
NC_007643  Rru_A0809  hypothetical protein  36.21 
 
 
646 aa  45.1  0.004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
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