| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0719 |
|---|
| Symbol | |
|---|
| ID | 8131643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 840661 |
|---|
| End bp | 842586 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644864003 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003016309 |
|---|
| Protein GI | 253687119 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA AACCTTCATA CCTCAAATTA AATAGATTAG TCATAACTAA AGCTGGCAAA
CAACTATATG ATGAAAAATT TCACGATGGA ATAAACATAA TCAGAGGAGA GCACTCTGTA
GGAAAATCAA CAATTTTAGA TATGATTTTT TATGTTTTAG GTGGAGAATT AAAAAAAGAC
GACTGGAAAT ATCCAGCTGA TGAATGCTCA AATGTTAACG CAGAGATTAC AATCAATGAC
CGGATTATTA CTTTAACCAG ACCGGTGGAT CCTAGTGGTG CAGTTCCTCA TATTAAAATC
TATGAGGGAG AGTATGATAA GGCGATGAAA GATGCAGATG GCTGGCTAGA CTATGGCTCA
AGGAGAAGCA ATGAGCGATT AAGTTTCTCA GAAATGATGT TTGAACTTTT CGATTGGGGA
CAATATAAAT CTGATAGTTA TCAGAATTTA ACTATGCATC AAATAATGCG ACTCATTTAT
TTAAGTCAAT CATCAGATTC CAATAGAATA TTTCGTAAAG AGTCTACTCG TTCTGACAAT
GAAAATACTA GAACAGCTAT CGCCGAGTTT CTTTTCGGTC TTGATGATTT GGAAACTCAC
TCAGTTCGTC AAAGTCTATT GAAGTATGAG AGAGATTATG AAAATACTGG AACAGAATTA
AGAGCATATT TCGAGCTTTT AGGTAACGAT GCTAGTCTAA CAGTTGAAAT AATTAACATA
TTATTAAATG AAAAACACAT TGAACTATCC GAAATAGACT CAAAGAAAGA AATTTTATTA
CGTTCAACAG ATAATATTGA TAACAACAAT GAATATAACT TAGCAATCGA ACGCAATGAT
ATTCTTTTAA AAATACAATC ACTAACAAAC AAAATATCAT TAAATAACAA TAATTTAAGC
TCAATCAAGA CCGAGATACA GGACTGTTTG CTTTTTGGGC AGAACTTAGT ATATCGTTTA
AAATCCTTGA ATGAATCACA AGAAACATAT AAAGGTTTAG GTCGGATTTC TTTTGAATAC
TGCCCTTGTT GCTTAACACC AATATCAGAA CACGATAACA CTGATAATTA TAGTGGTTGC
GCACTTTGCA AATCAACAAC CAACAATTCC TCATTAGAGG AGAAATATAT TGAGTCACTG
AATGAATTGC AATATCAACA GCGTCAAAAT GATAAGATTA TAGAAAAACT ATATGGTTCA
GCAGAATACA TAGAGGGCTA TATTCAAGAA CTCCGAAAAG AACTTGAAAA TTTACAAAAT
AGATTATTTG AAATCAATTT AGTTTCAAAT CATCGTGAAC TGGCTATAAC TTCAATCATA
GAAGAAAGAA CTGCAAAACT CATTGAAATC AACTCCCTGC AAGATAAAAT AGATTCAATA
GCTAAAGTTG ATGACCTAAA ATTGAAACGT GAAGACATCG CAAAGCAAAT GGAAAATTGT
CGTTCACGAA TAGCCGCTCT TGAGGCAAAA AGCCAGCATA GAAAAGAATA TGTTTACTCA
AAACTGTCTG AGTTTTCTAC TTTTATTCTT GAAGGAGACT CGGGTAATGA AGAGCTGTTT
AAAACAGCAA CTCAACTTTC ATCAGAGATA GATTTTGCAA AAGATCGCTG GCTTTTGAAT
GAACGAGTAA ATTATTCAGA CAGTTCAAAC GTTGTCAAAA AAGCAGCTCT ACATTTAGCA
TTCCTTATTT TTTCAATCGT TGATTCAGCT TGCCGATACC CTCGTTTTTC CATCATGGAC
TTTGAATGCG GGGATATAAA TGAAGCTCGC AGCCATAACC TCCAAAAATT AATCACTACA
AGCCTTAGTG ATTTAAAAGG CTTTCAACTT ATTATGACCA CATCTAAAAT TGATTCATCT
TTAAATAACA ACACTTACGG AGTTGGTCGC TATTATGATA AAAATGACTA CATTTTGAAA
ATTTAA
|
|---|
| Protein sequence | MIKKPSYLKL NRLVITKAGK QLYDEKFHDG INIIRGEHSV GKSTILDMIF YVLGGELKKD
DWKYPADECS NVNAEITIND RIITLTRPVD PSGAVPHIKI YEGEYDKAMK DADGWLDYGS
RRSNERLSFS EMMFELFDWG QYKSDSYQNL TMHQIMRLIY LSQSSDSNRI FRKESTRSDN
ENTRTAIAEF LFGLDDLETH SVRQSLLKYE RDYENTGTEL RAYFELLGND ASLTVEIINI
LLNEKHIELS EIDSKKEILL RSTDNIDNNN EYNLAIERND ILLKIQSLTN KISLNNNNLS
SIKTEIQDCL LFGQNLVYRL KSLNESQETY KGLGRISFEY CPCCLTPISE HDNTDNYSGC
ALCKSTTNNS SLEEKYIESL NELQYQQRQN DKIIEKLYGS AEYIEGYIQE LRKELENLQN
RLFEINLVSN HRELAITSII EERTAKLIEI NSLQDKIDSI AKVDDLKLKR EDIAKQMENC
RSRIAALEAK SQHRKEYVYS KLSEFSTFIL EGDSGNEELF KTATQLSSEI DFAKDRWLLN
ERVNYSDSSN VVKKAALHLA FLIFSIVDSA CRYPRFSIMD FECGDINEAR SHNLQKLITT
SLSDLKGFQL IMTTSKIDSS LNNNTYGVGR YYDKNDYILK I
|
|---|
| |