Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2049 |
Symbol | |
ID | 5455451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2234110 |
End bp | 2236005 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640877626 |
Product | hypothetical protein |
Protein accession | YP_001413320 |
Protein GI | 154252496 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.977561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00020723 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAGCTATT CTCATTTTCA TATCAGGCGT CTTCGAGTGC TTCTGAAAGG AGCGTCGGTG TACGACCAGA GCTTTCATGC CGGCGTCAAT ATAATCAGGG GAGAGAATGG CTCCGGCAAA TCCACAATTG CCGATTTCAT TTTTTATATC CTCGGCGGAG AGTTTGATAA CTGGAAGACG GTGGCCGCGA ACTGCGATGA AGTGCAGGCC GAAGTCGCGA CACAAGGCGG CGTGCTGACG CTCCGCAGGG AGATTGACCG TGCGCAAACC CCAATGCACG TCTTCTTTGG TCCAATGGTG GATGCGGAGC AACATGGGCT AGACGGATGG GAAACCTATC CTATCCGCAG GTCGGAAAGC CGAGAGAGCT TTTCACAGGT TCTGTTTCGC GCATCAGGTA TTCCTGAAGC GCAAAGCCAA GGAGCTGCCA ATATCACCAT GAACCAATTG ATGCGGTTAC TTTACTCGGA CCAGCGTACG CCGGCGGCAT TTCTTTTCCG ATTTGAACCG TTCGATACGC GCGAAATCCG TGAAGCGGTC GGTGATCTCG TTTGCGGGCT CAGCGTATAT GAGCTGTATG AGATAGAACT CAATCTGCGC AAGCTTGATA AACAATTTGA TGAAAAGAAC CGTCAGTATA CGGCCCTTTT GAGCGTGCTG CCACCGGATG AAGCGCTTTC GCGGGTGGAG ACAATTGATA GCCGCGTGGT CAACATGATC GCTGAATACG ACAGATTGGC AACGGAGATT GACAACGTTG ACGAGCTTCT CGATTCCGGT CGTGCTCAGG AGTTTATAGC GGGACAAAAG AAAGCAGCCG ACGAGCTGCG GAACTACCGC AAGCAGATTG CGTTGAATGA ACAAAATCTT CACATCAACG AACTTGAAGT TGCCGATCTC ACCAACTTTC TCGAATATCT GGAAGATCTG GCGGAAAAAT TGCCACGAGC GCAAACCTCA TCAGACATCG TTGGGAATAT CGACTTTACC CATTGCCCAG CATGCCTCGC ACCGCTGTCT GATAGCCTAG GGCCGGAACA TTGCGTGCTG TGCGGCACCA AGACTGATCC CGAGCATGAG CGCTCCCGCT ATCTCCAGAT CAAGATGGAT TTGGACATAC AGATACGGGA ATCCCGACAG CTCCTAGAGG AGAAAAAGCG TTCTTCTGCC AACATGGAGC GCGAGCTTCG TCGGCTGCGC CTTAATTACC AAGCAGAGCT TTCCGAATAC ACCGTCAGGT ATGAGATAAG TATCTCGCCT CGTGATAGTT TTGTCGCCGA GCGCTATCAG CGCCTCGGCC AGATTGACCG TGAGCTATCA GAGTTGACGC GGCTTCGGGA AAGAGCCCTT GAGATACAAT CGCTTAGCGA CGAAAAGGCT GCTTTGCAGG AGCAGATCAA CAGCCTGAAG GATCGCCAGA AAGCCTTGGA AGTCGCCAGC GGGCAACGCA GAAGGCAGGC GCTGACACGT GTTTCCGAAA CCGCGAAAGC CATTCTGAAA CAAGATTTGG ATCGCCAAGA TGAGTTCCAG AATGCTCAGA GCGTGGCCGT TAATTTTGGT GACAATTCTG TCCTTGTCGA TGGCGAGCTG AATTTTGCCG AAAGCAGCAA TGTCATTGTA AAGAATGCGG TCATTCTCTC GCTCCTGCTG GCAGCTACGC AGGATAAGAA ATTCTATCAT CCGCGTTTTG TCTTATTCGA TAACATCGAA GACAAAGGGA TGGAGCAGAA CCGGAGCCAT AATTTCCAAG AGATCATTTT GCGGGCTTCG GAAGATGCGG AGTTGGACCA CCAAATTATT TTCACAACCT CGATGTTCAA CCCATCTCTC GATGAAGATA AATACGCAAT CGGGCCGCAC TACACTCACG AGAACCGTAC TCTTTCCGTC GGCTAA
|
Protein sequence | MSYSHFHIRR LRVLLKGASV YDQSFHAGVN IIRGENGSGK STIADFIFYI LGGEFDNWKT VAANCDEVQA EVATQGGVLT LRREIDRAQT PMHVFFGPMV DAEQHGLDGW ETYPIRRSES RESFSQVLFR ASGIPEAQSQ GAANITMNQL MRLLYSDQRT PAAFLFRFEP FDTREIREAV GDLVCGLSVY ELYEIELNLR KLDKQFDEKN RQYTALLSVL PPDEALSRVE TIDSRVVNMI AEYDRLATEI DNVDELLDSG RAQEFIAGQK KAADELRNYR KQIALNEQNL HINELEVADL TNFLEYLEDL AEKLPRAQTS SDIVGNIDFT HCPACLAPLS DSLGPEHCVL CGTKTDPEHE RSRYLQIKMD LDIQIRESRQ LLEEKKRSSA NMERELRRLR LNYQAELSEY TVRYEISISP RDSFVAERYQ RLGQIDRELS ELTRLRERAL EIQSLSDEKA ALQEQINSLK DRQKALEVAS GQRRRQALTR VSETAKAILK QDLDRQDEFQ NAQSVAVNFG DNSVLVDGEL NFAESSNVIV KNAVILSLLL AATQDKKFYH PRFVLFDNIE DKGMEQNRSH NFQEIILRAS EDAELDHQII FTTSMFNPSL DEDKYAIGPH YTHENRTLSV G
|
| |