14 homologs were found in PanDaTox collection
for query gene Daci_0927 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_0927  hypothetical protein  100 
 
 
421 aa  835    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0647  hypothetical protein  33 
 
 
377 aa  149  1.0000000000000001e-34  Rhodoferax ferrireducens T118  Bacteria  normal  0.910142  n/a   
 
 
-
 
NC_011146  Gbem_0789  hypothetical protein  30.99 
 
 
374 aa  147  5e-34  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3253  hypothetical protein  30.46 
 
 
385 aa  142  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.756749  n/a   
 
 
-
 
NC_010623  Bphy_5305  hypothetical protein  31.35 
 
 
391 aa  136  7.000000000000001e-31  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0275218 
 
 
-
 
NC_010571  Oter_3034  hypothetical protein  32.14 
 
 
371 aa  129  8.000000000000001e-29  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5340  hypothetical protein  30.79 
 
 
361 aa  128  2.0000000000000002e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4334  hypothetical protein  29.26 
 
 
357 aa  122  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.72153  normal  0.0216853 
 
 
-
 
NC_010552  BamMC406_4851  NHL repeat-containing protein  29.02 
 
 
357 aa  122  9.999999999999999e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0728414 
 
 
-
 
NC_008009  Acid345_1897  hypothetical protein  29.68 
 
 
361 aa  120  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000359391  hitchhiker  0.000915589 
 
 
-
 
NC_007614  Nmul_A1390  hypothetical protein  30.25 
 
 
379 aa  116  7.999999999999999e-25  Nitrosospira multiformis ATCC 25196  Bacteria  unclonable  0.000000676729  n/a   
 
 
-
 
NC_008752  Aave_1386  hypothetical protein  28.96 
 
 
361 aa  103  4e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  0.473067  normal 
 
 
-
 
NC_013131  Caci_6608  hypothetical protein  30.54 
 
 
390 aa  101  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1294  hypothetical protein  31.74 
 
 
443 aa  77.8  0.0000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
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