Gene Bamb_4334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4334 
Symbol 
ID4313228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1260797 
End bp1261870 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content60% 
IMG OID638152174 
Producthypothetical protein 
Protein accessionYP_776220 
Protein GI115359082 
COG category 
COG ID 
TIGRFAM ID[TIGR03118] conserved hypothetical protein TIGR03118 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.72153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0216853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG TCCATACAAC GCTCGGCGCT GCGATGATCG CATTCGTGCT GACCAGCGTC 
GTCGCATGCG GCAATTCATC CCACGTCAGT CAGTACAAGG TCGATGTACT GGTTTCCGAC
GGTGCCCTGC CCGCTGCTCA CGTGGATACA AACCTGAAGA ATCCGTGGGG CATTGCATTC
AATCCCAGGG GTTTTGTGTG GGTCGCGGAT AACGGGACGC AGCACGCAAC GCTCTATGAC
GGCAATGGCG TACCGCAATC GCTCGTCGTG ACGATCCCCG CCGGCTCGCA AGGCGACGCC
TCCCCCACGG GCATCGTATT CAATGGCACG TCGGACTTCG TGGTGAGCCA GGGCACAAAA
TCGGGGCCGG CATCCTTCAT TTTCGTCGGC GAGGGCGGAA CGATCACCGC CTGGTCGCCA
GCCGTCAATC CGACCTCGGC CGTCACCGTG TTCGACAGCG GCGGCAGCGC CGTCTACAAA
GGGCTCGCCA TGGCCAGCAA CAACGGCGCG AATTTCCTGT ACGCAACGGA CTTCCACAAC
AACAGGATCG ATGTTTTCGA CAGGACCTTC ACAAAGGTGA CGACGACCGG TGCATTTCAA
GATCCCGCTT TGCCGGCCGG GTTTGCGCCG TTTGGAATTC AGGCGATCAA CTCGAAACTT
TACGTTGCTT ATGCAAAGCA GGATGCGGCA GCACACGACG ACGTCGCTGG TGCAGGATTG
GGTTTGATCG ACGTGTTCAG CCCATCGGGA CAATTCATTC AACGCTTCGC CTCCGGCGAA
CCGTTGAATG CGCCGTGGGG CATGGCGCCT GCACCCGCGA ATTTCGGCCG CTTCAGCAAC
ACCGTTCTGA TCGGCAACTT CGGTGACGGC ATGATCCACG CGTTCGATGC GACGTCAGGC
ATGCTGCGCG GGACCCTGCA GCAACCCGAC GGCAAGGCGA TCGTCGAGCC GGGGCTGTGG
GGCATCGCAT TCGGCAACGG CCTCAACAAT CAACCTGTCA ATACGCTGTT TTTTGCTGCC
GGCCCCAATG ACGAAGCCGA CGGTGTCTAT GGCCGCATCG ACGTCGGCCC GTGA
 
Protein sequence
MKQVHTTLGA AMIAFVLTSV VACGNSSHVS QYKVDVLVSD GALPAAHVDT NLKNPWGIAF 
NPRGFVWVAD NGTQHATLYD GNGVPQSLVV TIPAGSQGDA SPTGIVFNGT SDFVVSQGTK
SGPASFIFVG EGGTITAWSP AVNPTSAVTV FDSGGSAVYK GLAMASNNGA NFLYATDFHN
NRIDVFDRTF TKVTTTGAFQ DPALPAGFAP FGIQAINSKL YVAYAKQDAA AHDDVAGAGL
GLIDVFSPSG QFIQRFASGE PLNAPWGMAP APANFGRFSN TVLIGNFGDG MIHAFDATSG
MLRGTLQQPD GKAIVEPGLW GIAFGNGLNN QPVNTLFFAA GPNDEADGVY GRIDVGP