14 homologs were found in PanDaTox collection
for query gene Cpin_5538 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_5538  response regulator receiver protein  100 
 
 		 321 aa  658    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.928503 
 
 
-
 
NC_013731  Slin_6803  response regulator receiver protein  32.15 
 
 		 302 aa  154  2.9999999999999998e-36  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5746  response regulator receiver protein  33.11 
 
 		 298 aa  136  6.0000000000000005e-31  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_0682  response regulator receiver protein  24.38 
 
 		 246 aa  55.1  0.000001  Flavobacterium johnsoniae UW101  Bacteria  hitchhiker  0.00000269767  n/a   
 
 
-
 
NC_009456  VC0395_0387  response regulator  33.33 
 
 		 261 aa  51.2  0.00002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  30.61 
 
 		 255 aa  50.1  0.00006  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_010338  Caul_2206  response regulator receiver protein  30.71 
 
 		 267 aa  47.4  0.0003  Caulobacter sp. K31  Bacteria  normal  0.0547033  normal  0.44527 
 
 
-
 
NC_008347  Mmar10_1191  response regulator receiver protein  30.77 
 
 		 518 aa  44.7  0.002  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_0137  two component transcriptional regulator, LytTR family  40.91 
 
 		 237 aa  44.7  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3838  LytR/AlgR family transcriptional regulator  30.77 
 
 		 254 aa  44.3  0.003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.479778 
 
 
-
 
NC_009784  VIBHAR_07024  transcriptional regulator  28 
 
 		 263 aa  44.3  0.003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_3487  LytR/AlgR family transcriptional regulator  37.08 
 
 		 253 aa  43.5  0.005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.76921  normal  1 
 
 
-
 
NC_007912  Sde_4004  response regulator receiver domain-containing protein  25.25 
 
 		 269 aa  43.1  0.006  Saccharophagus degradans 2-40  Bacteria  normal  0.174802  normal  0.249031 
 
 
-
 
NC_013165  Shel_00400  response regulator of the LytR/AlgR family  32.71 
 
 		 237 aa  42.7  0.009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.132657  normal  1 
 
 
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