| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_4004 |
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| Symbol | |
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| ID | 3967423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 5040116 |
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| End bp | 5040925 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637923101 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_529471 |
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| Protein GI | 90023644 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.174802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.249031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAA TAATAAATTG GTACGGGTTT GAAGGTCGCT TAGCGCTTAT TTTTTGGCTG
GGCTATATGG CGTGGCTAGT AGTGTTTTGT GTTATCCATC AAATGGTTAT TATGGATTCC
GGCGTTAATG TAGTTAGCTC CATACTGTGG ACCCTGCGCG AATGGGGCTT TTGGATGTTA
ATTACCCCTA CCCTTGTAAG CCTGCTTAGT AAAACAGAAC ATTACGAAAA GCCGTTAAAG
GCTAAGCTGC ATATTTTAGG CGCGGCGTTA ATTGTGGCCT TGTTATATAA AGTGGCCGTT
AACCTTTATA GCGGTAGAAG TGATGTGCTG GCCACATTGG TTAGTTATTC CCCTAAATAT
TTACAGGTTT TGTTGGTGAT TAGTTTGGGC TGGTATGTAC TGCTTAAAGG CGAGCAGGTT
TACTACGCGA ATAAAAACCC CACAACAGAA CCAGATTCAC CTAAGAATAA CGCGTCGCGC
TTATTGGTAA GCACTGGCAG CGCAGAGGCG TTTATACATG TACAAGATAT AACCGCGGTG
CAAGCTGCCG GTAACTATGT AGATATCCAT ACGGCTAATA GTAGTTATAT TTTACGCGCA
ACCCTTAAGC ACCTTTTAGA GCAACTGCCC CAAGCCCAAT TTGTGCGCTG CCATCGCTCT
GCGGTTGTAA ATATTAACTA CGTAAAGCAA CTGCATTCTT TTGCCACAGG TAAAGGCGAG
CTAGAACTGG AGTGTGGCCG GCTTGTGCCT TTGGCTAAAA GCTATCGCAC GCAATTTAAA
CAAAGCGTTA TAAATACAGC CGATTGCTAG
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| Protein sequence | MRKIINWYGF EGRLALIFWL GYMAWLVVFC VIHQMVIMDS GVNVVSSILW TLREWGFWML
ITPTLVSLLS KTEHYEKPLK AKLHILGAAL IVALLYKVAV NLYSGRSDVL ATLVSYSPKY
LQVLLVISLG WYVLLKGEQV YYANKNPTTE PDSPKNNASR LLVSTGSAEA FIHVQDITAV
QAAGNYVDIH TANSSYILRA TLKHLLEQLP QAQFVRCHRS AVVNINYVKQ LHSFATGKGE
LELECGRLVP LAKSYRTQFK QSVINTADC
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