Gene Slin_5746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5746 
Symbol 
ID8729521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6989316 
End bp6990212 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003390510 
Protein GI284040580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGAT TCCTTAATCA ACCCTATCCG ATTGATTACT CCGCCGGAGC TCAACTCCGA 
AAGGCTACGT TGATTGGCTT ATTTGTGGGC TTATTCCTGC TTGTCTTCCA GCCATTTGGC
CTAAACTCAT GGGAAACGCC TAACAAAGTG CTCAAGATTC TGGGCTTCGG TGCAGTGACG
TTTGCGGTTA CCGCCTTTAA TTTCATCATT TTGCGCAGGC TGTTTCCCCG GCTATACGTA
GAGGAAGAGT GGACGGTTGG GCGGGAAATT GTGGCGTTGA TGATTAACAT TATGCTAATC
GCTATAGCTA ACCGGTTCTA TCTGGGCTGG CTACTGGATG TGGGAGAGCA TAGCAGTATA
AGTTGGGCAG GTATGATCCT GGTAACGTTC CTCATCGGGC TATTTCCTGT GACAGGGCTC
GTATTTGTCA GTTATATCAC CCGGCTTAAA AAATACAGCC AGGCCGCTGC CAGCCTGCCA
ATTCATGTAC ATAATGAAGT AACGACGCTC GCCCGAACTG CCCCCGTCGG TCCGGCAACT
GAGCCTGTTA ACGCGACCGT TACCCTCGTG GCCGACAACG AAAAAGATAG CGTCAGCCTG
GATGCAGAAG ATTTGCTCTT TGTTGAGTCG AGTGATAATT ACTGCACCGT TACATATCTC
AAAAATAAGC AGGTAGCCAA ACCGCTACTG CGCAGCAGCC TCAGTCGGCT GGAGAAACAA
ATTACGCAGC CCTATATTGT CAGATGCCAC CGTTCGTACA TCGTTAACCT CAACCGAGTG
GAGCGTGTAA CGGGGAATGC GCAGGGGTAT AAACTGCATC TACTGTCCGG GCAGTTTATC
GTTCCCGTAT CCCGGCAATA CAACGAGACG CTGATTGCGG AGTTAAAAGC GTTGTAA
 
Protein sequence
MVRFLNQPYP IDYSAGAQLR KATLIGLFVG LFLLVFQPFG LNSWETPNKV LKILGFGAVT 
FAVTAFNFII LRRLFPRLYV EEEWTVGREI VALMINIMLI AIANRFYLGW LLDVGEHSSI
SWAGMILVTF LIGLFPVTGL VFVSYITRLK KYSQAAASLP IHVHNEVTTL ARTAPVGPAT
EPVNATVTLV ADNEKDSVSL DAEDLLFVES SDNYCTVTYL KNKQVAKPLL RSSLSRLEKQ
ITQPYIVRCH RSYIVNLNRV ERVTGNAQGY KLHLLSGQFI VPVSRQYNET LIAELKAL