| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5538 |
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| Symbol | |
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| ID | 8361715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7065249 |
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| End bp | 7066214 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644967683 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_003125167 |
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| Protein GI | 256424514 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.928503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTTCG AAATTTCAGC CTACATGATG GATACTATCA GCTCCCTGTT CAAACGACCT
TATCCCTTAC CAGAAACCTG GCGCAGGCAA TGGACCATGA CGATTGCCCT GAGCGGGGCG
GTATTCCTGT TCCTTTTTCT GTTCCGGCCT TTTAATGGTC AGCGGGATAC GCTGGACGCT
TTCTGGGGAA GTCTGGAGGG AGCCGCTACG GTGTTTGGGG TAGTTATATT GTATTATGGA
CTGGTATTCC GCTTGTTTCC GGCTTATTTC AGGGAAGATA AGTGGACGAC CGGCAGGGAG
TCGCTCTGGA CTCTGGTCAT TATCGTCGCC ATTGCGCTGG CTAACATAGG AGTAATGGCG
CTGAGTGGTC AATGGCGTTA TTCCTGGAAA GAAGCCTTAC TGATGGTTAT CTATACGGCT
GTGATCGGGA TTGCGCCGGC TACGACCAGT ATTATGATCA ACCAGGCCCG TTTACTAAGG
CGTTATCGTA ACAGGGCGGT GGGGCTGAAT CAGACCATAG CCGCGCCTGT GATAGAGGAG
GAGGTGTCCC CGGCCTCTGT GGAGGCAGAA GTGCTTTCTT TTACAGCGGA TAATGGAAAG
GACTATATTT CTCTGCATCC AGGACAATTA CTGGCGGTCA CGTCGGCAGA TAACTATGTC
AGGCTGTATT TCATGGAAGG AGATGATCTG AAACAGGAGT TGCTGCGTTC CAGTCTGCAG
AAAATTGAGG CCAGTCTGAA CACCCATATC AACTTCTGGC GTTGTCACCG GACTGCCATT
GTTAACCTTT TCCTGGTAGA AGAGGTCAGC GGTACCGCCC AGGGATACCG GCTCCATATC
CTGCATTTAC CCGACACGAT CCCCGTATCC AGAAGTCTGA ATACCGCCCT GAGGGAAAAG
CTGGCCAATC GTATGACCAT GCCATTCACC CCGGCAGCTG CAGCGGTTCA GGCGACCCGT
CCCTAA
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| Protein sequence | MPFEISAYMM DTISSLFKRP YPLPETWRRQ WTMTIALSGA VFLFLFLFRP FNGQRDTLDA
FWGSLEGAAT VFGVVILYYG LVFRLFPAYF REDKWTTGRE SLWTLVIIVA IALANIGVMA
LSGQWRYSWK EALLMVIYTA VIGIAPATTS IMINQARLLR RYRNRAVGLN QTIAAPVIEE
EVSPASVEAE VLSFTADNGK DYISLHPGQL LAVTSADNYV RLYFMEGDDL KQELLRSSLQ
KIEASLNTHI NFWRCHRTAI VNLFLVEEVS GTAQGYRLHI LHLPDTIPVS RSLNTALREK
LANRMTMPFT PAAAAVQATR P
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