25 homologs were found in PanDaTox collection
for query gene Coch_1945 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_1945  gliding motility protein GldG  100 
 
 
562 aa  1147    Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_08361  GldG  45.23 
 
 
557 aa  489  1e-137  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.196642  n/a   
 
 
-
 
NC_009441  Fjoh_2721  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  45.45 
 
 
561 aa  490  1e-137  Flavobacterium johnsoniae UW101  Bacteria  normal  0.624688  n/a   
 
 
-
 
NC_013061  Phep_3236  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  34.25 
 
 
559 aa  306  7e-82  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.0923144 
 
 
-
 
NC_008255  CHU_1547  gliding motility protein, ABC-related protein  30.04 
 
 
557 aa  287  2.9999999999999996e-76  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00000000436101  normal 
 
 
-
 
NC_013037  Dfer_3719  gliding motility protein, ABC-related protein  30.65 
 
 
550 aa  284  2.0000000000000002e-75  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_0220  hypothetical protein  31.96 
 
 
561 aa  283  8.000000000000001e-75  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.447855 
 
 
-
 
NC_013132  Cpin_0232  ABC-type uncharacterized transport system involved in gliding motility auxiliary component  31.64 
 
 
566 aa  279  8e-74  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4905  gliding-associated putative ABC transporter substrate-binding component GldG  32.94 
 
 
555 aa  272  9e-72  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1768  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  24.01 
 
 
508 aa  118  3e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2203  ABC-type uncharacterized transport system involved in gliding motility, auxiliary component-like protein  20.07 
 
 
891 aa  75.1  0.000000000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.775873  n/a   
 
 
-
 
NC_009943  Dole_2068  ABC-type transport system protein involved in gliding motility auxiliary component-like protein  26.92 
 
 
729 aa  59.3  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.232799  n/a   
 
 
-
 
NC_014150  Bmur_0102  ABC-type uncharacterized transport system  20.98 
 
 
542 aa  57  0.0000008  Brachyspira murdochii DSM 12563  Bacteria  normal  0.593442  n/a   
 
 
-
 
NC_010571  Oter_4185  hypothetical protein  22.62 
 
 
643 aa  57  0.0000008  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4389  hypothetical protein  20.93 
 
 
703 aa  57  0.000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0446435 
 
 
-
 
NC_009656  PSPA7_1469  hypothetical protein  22.35 
 
 
614 aa  55.5  0.000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.662895  n/a   
 
 
-
 
NC_011884  Cyan7425_4025  hypothetical protein  22.55 
 
 
517 aa  55.1  0.000004  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00023006 
 
 
-
 
NC_008554  Sfum_1753  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like  22.63 
 
 
481 aa  53.5  0.000009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.424796  normal  0.0791157 
 
 
-
 
NC_011899  Hore_12990  hypothetical protein  23.49 
 
 
498 aa  52.4  0.00002  Halothermothrix orenii H 168  Bacteria  normal  0.846752  n/a   
 
 
-
 
NC_010320  Teth514_0983  ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein  25.1 
 
 
462 aa  52.8  0.00002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_39200  hypothetical protein  20.27 
 
 
610 aa  51.6  0.00004  Azotobacter vinelandii DJ  Bacteria  normal  0.320982  n/a   
 
 
-
 
NC_002977  MCA3076  hypothetical protein  21.4 
 
 
440 aa  49.3  0.0002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.616647  n/a   
 
 
-
 
NC_013440  Hoch_5379  ABC-type uncharacterized transport system  21.34 
 
 
998 aa  48.5  0.0003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2807  hypothetical protein  27.37 
 
 
580 aa  46.2  0.002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0625078  normal  0.688312 
 
 
-
 
NC_002977  MCA1563  hypothetical protein  21.31 
 
 
622 aa  45.1  0.004  Methylococcus capsulatus str. Bath  Bacteria  normal  0.348161  n/a   
 
 
-
 
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