18 homologs were found in PanDaTox collection
for query gene Caul_1457 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010338  Caul_1457  hypothetical protein  100 
 
 		 88 aa  175  2e-43  Caulobacter sp. K31  Bacteria  normal  1  normal  0.118068 
 
 
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NC_011757  Mchl_1851  transcriptional regulator, XRE family  47.46 
 
 		 98 aa  56.6  0.0000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.367086  normal  0.712374 
 
 
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NC_010725  Mpop_1667  helix-turn-helix domain protein  49.15 
 
 		 98 aa  54.3  0.0000006  Methylobacterium populi BJ001  Bacteria  normal  0.130634  normal  0.758617 
 
 
-
 
NC_010172  Mext_1572  helix-turn-helix domain-containing protein  44.07 
 
 		 98 aa  53.5  0.0000008  Methylobacterium extorquens PA1  Bacteria  normal  0.328104  normal  0.0948744 
 
 
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NC_011757  Mchl_1765  transcriptional regulator, XRE family  52 
 
 		 111 aa  46.2  0.0001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.21352  normal  0.204595 
 
 
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NC_010172  Mext_1487  helix-turn-helix domain-containing protein  52 
 
 		 111 aa  46.2  0.0001  Methylobacterium extorquens PA1  Bacteria  normal  0.1034  normal  1 
 
 
-
 
NC_010511  M446_2477  XRE family transcriptional regulator  40.85 
 
 		 106 aa  44.3  0.0005  Methylobacterium sp. 4-46  Bacteria  normal  0.229914  normal  0.245921 
 
 
-
 
NC_007643  Rru_A3065  XRE family transcriptional regulator  37.93 
 
 		 98 aa  43.5  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011367  Gdia_3581  hypothetical protein  40.35 
 
 		 175 aa  43.1  0.001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0426544  n/a   
 
 
-
 
NC_011004  Rpal_3572  transcriptional regulator, XRE family  38.57 
 
 		 121 aa  43.5  0.001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.405573  n/a   
 
 
-
 
NC_009636  Smed_2202  helix-turn-helix domain-containing protein  37.1 
 
 		 98 aa  43.1  0.001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.119587 
 
 
-
 
NC_011894  Mnod_3537  transcriptional regulator, XRE family  37.84 
 
 		 97 aa  42.7  0.002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_1708  transcriptional regulator, XRE family  40.38 
 
 		 102 aa  42  0.003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_3788  hypothetical protein  43.94 
 
 		 68 aa  42  0.003  Agrobacterium vitis S4  Bacteria  normal  0.839314  n/a   
 
 
-
 
NC_007964  Nham_2433  XRE family transcriptional regulator  41.67 
 
 		 121 aa  40.8  0.006  Nitrobacter hamburgensis X14  Bacteria  normal  0.40389  n/a   
 
 
-
 
NC_007958  RPD_3074  helix-turn-helix type 3  39.47 
 
 		 131 aa  40.8  0.006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.620865  normal  1 
 
 
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NC_008786  Veis_4125  XRE family transcriptional regulator  38.98 
 
 		 96 aa  40.8  0.007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.230507 
 
 
-
 
NC_007643  Rru_A0304  XRE family transcriptional regulator  39.66 
 
 		 96 aa  40.4  0.009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.397119  n/a   
 
 
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