| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3572 |
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| Symbol | |
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| ID | 6411246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3821483 |
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| End bp | 3821848 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713450 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_001992547 |
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| Protein GI | 192291942 |
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| COG category | [K] Transcription |
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| COG ID | [COG2944] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.405573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAGG TACAGCGGCT GCGGCTGAAA GCGGACGGAC GGATCGTCGA ACTGCGCGAC
GGCCACGAGT TCCCGCTCGC GCCGATCGGT CCCGACCCGA TCGCGCACAC TCCCGCGGCT
GAGCCGAAGG TTCGCGAGTT GCGGCTGCGC GCCGGGCTGA CCCAGACCGA GTTCGCCGCG
CGGCTCGGTG TGCCGGTCGA GACCATCCGG AACTGGGAGC AGGGCAAGCG GAGCCCGCGC
GGACCGGCGC GTGCGTTGCT GACCGTGATC GCGCATACGC CCGATCTGGT GTTTGCCGCG
CTGGCCGGCC GCCGGGAAGA AATTAGTAAG CTCGTCGCCG CGCCAGCGAT TGGCAGCGAG
TGCTGA
|
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| Protein sequence | MTQVQRLRLK ADGRIVELRD GHEFPLAPIG PDPIAHTPAA EPKVRELRLR AGLTQTEFAA
RLGVPVETIR NWEQGKRSPR GPARALLTVI AHTPDLVFAA LAGRREEISK LVAAPAIGSE
C
|
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