15 homologs were found in PanDaTox collection
for query gene CPF_1469 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_1469  hypothetical protein  100 
 
 
206 aa  412  1e-114  Clostridium perfringens ATCC 13124  Bacteria  normal  0.22306  n/a   
 
 
-
 
NC_008262  CPR_1268  hypothetical protein  86.89 
 
 
205 aa  311  2.9999999999999996e-84  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_17840  protein of unknown function (DUF1535)  55.45 
 
 
299 aa  128  5.0000000000000004e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.457704  n/a   
 
 
-
 
NC_008531  LEUM_0817  hypothetical protein  61 
 
 
198 aa  128  6e-29  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.198905  n/a   
 
 
-
 
NC_002976  SERP1360  surface lipoprotein-related protein  38.39 
 
 
221 aa  120  1.9999999999999998e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  0.813334  n/a   
 
 
-
 
NC_002976  SERP0882  surface lipoprotein-related protein  33.48 
 
 
227 aa  111  8.000000000000001e-24  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1146  hypothetical protein  48.94 
 
 
169 aa  96.7  2e-19  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000000000279889  n/a   
 
 
-
 
NC_004116  SAG1227  hypothetical protein  52.48 
 
 
198 aa  94.7  8e-19  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.0000082221  n/a   
 
 
-
 
NC_012669  Bcav_3919  protein of unknown function DUF1535  39.13 
 
 
216 aa  63.9  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3380  hypothetical protein  34.83 
 
 
131 aa  63.2  0.000000003  Rhodopseudomonas palustris HaA2  Bacteria  hitchhiker  0.00652968  normal  0.0844825 
 
 
-
 
NC_013530  Xcel_2527  protein of unknown function DUF1535  39.13 
 
 
904 aa  61.6  0.000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.776522  n/a   
 
 
-
 
NC_012803  Mlut_22490  hypothetical protein  38.95 
 
 
304 aa  57.8  0.0000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.659605  n/a   
 
 
-
 
NC_013521  Sked_33750  protein of unknown function (DUF1535)  33.7 
 
 
199 aa  48.5  0.00007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0189  hypothetical protein  35.48 
 
 
585 aa  47.8  0.0001  Psychrobacter arcticus 273-4  Bacteria  normal  0.0774  normal  0.215146 
 
 
-
 
NC_007204  Psyc_0453  hypothetical protein  31.94 
 
 
176 aa  44.7  0.001  Psychrobacter arcticus 273-4  Bacteria  normal  0.387567  normal 
 
 
-
 
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