14 homologs were found in PanDaTox collection
for query gene RPB_3380 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007778  RPB_3380  hypothetical protein  100 
 
 		 131 aa  265  1e-70  Rhodopseudomonas palustris HaA2  Bacteria  hitchhiker  0.00652968  normal  0.0844825 
 
 
-
 
NC_007204  Psyc_0189  hypothetical protein  59.38 
 
 		 585 aa  113  7.999999999999999e-25  Psychrobacter arcticus 273-4  Bacteria  normal  0.0774  normal  0.215146 
 
 
-
 
NC_012669  Bcav_3919  protein of unknown function DUF1535  50 
 
 		 216 aa  95.5  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_22490  hypothetical protein  50.53 
 
 		 304 aa  87  8e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.659605  n/a   
 
 
-
 
NC_013521  Sked_33750  protein of unknown function (DUF1535)  46.39 
 
 		 199 aa  79.3  0.00000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_2527  protein of unknown function DUF1535  43.14 
 
 		 904 aa  74.3  0.0000000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.776522  n/a   
 
 
-
 
NC_009513  Lreu_1146  hypothetical protein  40.22 
 
 		 169 aa  72  0.000000000003  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000000000279889  n/a   
 
 
-
 
NC_013172  Bfae_17840  protein of unknown function (DUF1535)  37.08 
 
 		 299 aa  70.5  0.000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  0.457704  n/a   
 
 
-
 
NC_002976  SERP0882  surface lipoprotein-related protein  37.11 
 
 		 227 aa  66.2  0.0000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_0817  hypothetical protein  39.33 
 
 		 198 aa  66.6  0.0000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.198905  n/a   
 
 
-
 
NC_008261  CPF_1469  hypothetical protein  34.83 
 
 		 206 aa  63.2  0.000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.22306  n/a   
 
 
-
 
NC_002976  SERP1360  surface lipoprotein-related protein  33.03 
 
 		 221 aa  60.8  0.000000006  Staphylococcus epidermidis RP62A  Bacteria  normal  0.813334  n/a   
 
 
-
 
NC_008262  CPR_1268  hypothetical protein  35.23 
 
 		 205 aa  58.5  0.00000003  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG1227  hypothetical protein  29.7 
 
 		 198 aa  47.8  0.00005  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.0000082221  n/a   
 
 
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