Gene RPB_3380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3380 
Symbol 
ID3911182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3864263 
End bp3864658 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content50% 
IMG OID637885283 
Producthypothetical protein 
Protein accessionYP_486987 
Protein GI86750491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00652968 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0844825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGA TTAGAATCAT GAAATTCTTG AAATTGTCAT TGATTGCCGC TTTGTTGACT 
GCCGAGCCTA CATGGGCGCA AAGTTTGACT GGGCCCCAGA ACAATGCCGT TAGATCTGCG
AAACAGTACC TCAATATCTC AGGCTTCTCG CGACGCGGTC TGATCCGCCA ACTCTCATCA
GATGCTGGCG ATGGTTATGA TATTGCCGAT GCCACCGTAG CAGTAGATAG TCTGAACATT
GATTGGAATA AGCAGGCGAT AAGGTCTGCG AAACAGTACC TCAGCATTTC GGGGTTCTCT
TGCAAAGGCC TCATCAGGCA ACTTTCATCA AGTGCCGGCG ATGGGTACAC TGAGAGCCAA
GCAACCTACG GGGCACAACA GGCAGGCGCT TGCTAG
 
Protein sequence
METIRIMKFL KLSLIAALLT AEPTWAQSLT GPQNNAVRSA KQYLNISGFS RRGLIRQLSS 
DAGDGYDIAD ATVAVDSLNI DWNKQAIRSA KQYLSISGFS CKGLIRQLSS SAGDGYTESQ
ATYGAQQAGA C