Gene Psyc_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0189 
Symbol 
ID3514525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp225740 
End bp227497 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content37% 
IMG OID637668876 
Producthypothetical protein 
Protein accessionYP_263496 
Protein GI71064769 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTACTG AATCTATAAT TTTGTCTTTG ATTGTGTTCT TCTTGCTAAT AGCTTTTATT 
CGCCATGTAG TTTATCCACT GGTCATAGAC TCTTATTTTA AAGGGACTAA ATTTCTTGCT
GTGAAAGCCA GAGTTCAGCA ACACATTGAC GAGTGTAACG AACTTAATGA GCATATTGAG
CATTTGAAGT TGTCTTATAC TTATGCTGAG GCTACTGACT ATGGTGAAGG GCTGTTATCT
GATGCTAGTC GTTATAATAT GAAGAGGCGT ACTTGGGCTA CTGAATCAAG TGACAATCGA
TGGACACACA ATTGCTCAGC TTCTATTGTG AAAAGTGCTG ATAATCAACC TTATAAATAT
TTATGTAAAT ATTTCAATAT AAGTCCTAAC AAAGAGACGT TAGAGCAGTT TGAAGAGGTG
TTAAATAATT TTTCTGCTGT AGAACAGGGA AAGTATCTAT TAGAAAATGA GAGAGAAGCG
ATTGTTTCAA GTATCAGTAC TTCTCTCTCA CCCTACATCT TGAGACATTA TCGAGATAGG
GTTAATACAG AATTGGGTTT TAAAAAAATT AGTTTATCTA ATTTATATTT TCCTGTTTAT
ACCTTTAGAT ATGCTTCTGC TGGTGGCAAT AGTAAGTCTA ACTTTGCCTT AGAATTGAAT
TTAGACAGAC TAGAGAGATT TATTGGCTAC TTAGCCAATT TGTTAAAAGT TAAGAACAGC
GTCGCAGGTC AAAGGGCTCT TATGACTGCG AAACTAAGAG AAGAAATAAA AGAGAGAGAT
AGTTATGCCT GTAAGATTTG TAATCTTTCG ACTTCAGATG AAGCTAATCT TTTACTAGAA
ATTGATCATA TTATCCCTCT TTCAAAAGGA GGAGTAACCT GTGAAAGTAA TTTGCAGACA
TTATGCTGGA AATGTAATCG CTCGAAAGGT TCAAAAATAT ATAGTGCTGA TGTTATACCC
AATCCTGCAC TGACTGACTC AAGAAAATTA GATACGACTT GGCCACCTAA AGCCAGCACA
CCGACTGACT CAGGAAAATT AGATATGACT CGACCACCTA AAGCCAGTAC ACCGACTACA
GGCCTACAAA GTTCAACTTT TGAAGATGGT AGAACTAGAA ATGCGATGAC TAAACAAGGA
ACTAATCTGA CCAGACCACA AGCTAATGCC CTAAGATCGG CAAAAGACTA CATTGAGTAC
TCAGGTTATT CACGTAAAGG TCTTATTGAG CAGCTTCATG AATGTGATGA TTACGTTGTG
TCTGATGCTA CAGTTGCAGT AGATAGTCTA AACATTGATT GGAAAGAGCA GGCTGTGAAG
TCAGCAAAAG ACTACATTGA GTACTCAGGT TATTCACGTA AAGGTCTTAT TGAGCAGCTT
CATGAATGCG ATGATTACGT TGTGTCTGAT GCTACAGTTG CAGTAGATAG TCTAAACATT
GATTGGAAAG AGCAGGCTGT GAAGTCAGCA AAAGACTACA TTGAGTACTC AGGTTATTCA
CGTAAAGGTC TTATTGAGCA GCTTCATGAA TGCGATGATT ACGTTGTGTC TGATGCTACA
GTTGCAGTAG ATAGTCTAAA CATTGATTGG AAAGAGCAGG CTGTAAAGTC AGCAAAAGAT
TACCTTGAGT ACTCAGGTTA TTCATGTAAA GGCCTTATTG AACAACTTCA TGAATGTGAT
GACTATAGTT TAAGTGAAGC AACTTACGGA GCAGAACAGG CGTGCTTGTT CGTAGCTAGC
CTTACCTCTA AAAATTAA
 
Protein sequence
MSTESIILSL IVFFLLIAFI RHVVYPLVID SYFKGTKFLA VKARVQQHID ECNELNEHIE 
HLKLSYTYAE ATDYGEGLLS DASRYNMKRR TWATESSDNR WTHNCSASIV KSADNQPYKY
LCKYFNISPN KETLEQFEEV LNNFSAVEQG KYLLENEREA IVSSISTSLS PYILRHYRDR
VNTELGFKKI SLSNLYFPVY TFRYASAGGN SKSNFALELN LDRLERFIGY LANLLKVKNS
VAGQRALMTA KLREEIKERD SYACKICNLS TSDEANLLLE IDHIIPLSKG GVTCESNLQT
LCWKCNRSKG SKIYSADVIP NPALTDSRKL DTTWPPKAST PTDSGKLDMT RPPKASTPTT
GLQSSTFEDG RTRNAMTKQG TNLTRPQANA LRSAKDYIEY SGYSRKGLIE QLHECDDYVV
SDATVAVDSL NIDWKEQAVK SAKDYIEYSG YSRKGLIEQL HECDDYVVSD ATVAVDSLNI
DWKEQAVKSA KDYIEYSGYS RKGLIEQLHE CDDYVVSDAT VAVDSLNIDW KEQAVKSAKD
YLEYSGYSCK GLIEQLHECD DYSLSEATYG AEQACLFVAS LTSKN