8 homologs were found in PanDaTox collection
for query gene Avi_8047 on replicon NC_011982
Organism: Agrobacterium vitis S4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011982  Avi_8047  Ti-type conjugative transfer system protein TraG  100 
 
 		 182 aa  355  1.9999999999999998e-97  Agrobacterium vitis S4  Bacteria  normal  0.359482  n/a   
 
 
-
 
NC_011982  Avi_8128  conjugal transfer coupling protein TraG  99.28 
 
 		 654 aa  244  6e-64  Agrobacterium vitis S4  Bacteria  normal  0.147947  n/a   
 
 
-
 
NC_012853  Rleg_5517  conjugal transfer coupling protein TraG  51.82 
 
 		 665 aa  139  3e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0112559 
 
 
-
 
NC_009621  Smed_5396  conjugal transfer coupling protein TraG  50.36 
 
 		 639 aa  137  8.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.457132 
 
 
-
 
NC_011984  Avi_9186  conjugal transfer coupling protein TraG  59.48 
 
 		 656 aa  135  3.0000000000000003e-31  Agrobacterium vitis S4  Bacteria  normal  0.995414  n/a   
 
 
-
 
NC_011981  Avi_7061  conjugal transfer coupling protein TraG  53.24 
 
 		 655 aa  124  6e-28  Agrobacterium vitis S4  Bacteria  normal  0.920891  n/a   
 
 
-
 
NC_007961  Nham_4672  conjugal transfer coupling protein TraG  48.91 
 
 		 641 aa  94  1e-18  Nitrobacter hamburgensis X14  Bacteria  normal  0.811781  n/a   
 
 
-
 
NC_011991  Avi_9589  conjugal transfer coupling protein TraG  40.17 
 
 		 629 aa  81.3  0.000000000000007  Agrobacterium vitis S4  Bacteria  normal  0.283815  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>