22 homologs were found in PanDaTox collection
for query gene Avi_1061 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011989  Avi_1061  hypothetical protein  100 
 
 		 102 aa  207  3e-53  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
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NC_011369  Rleg2_0625  Stress responsive alpha-beta barrel domain protein  64.36 
 
 		 102 aa  144  5e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.853408 
 
 
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NC_012850  Rleg_0680  Stress responsive alpha-beta barrel domain protein  63.37 
 
 		 102 aa  143  9e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0525544 
 
 
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NC_009667  Oant_0045  stress responsive alpha-beta barrel domain-containing protein  45.45 
 
 		 102 aa  96.3  1e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
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NC_010172  Mext_0757  stress responsive alpha-beta barrel domain-containing protein  40.82 
 
 		 108 aa  77.4  0.00000000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.203414  normal  1 
 
 
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NC_008043  TM1040_3356  stress responsive alpha-beta barrel  31.68 
 
 		 104 aa  62  0.000000003  Ruegeria sp. TM1040  Bacteria  normal  0.426339  normal  0.411663 
 
 
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NC_014148  Plim_2425  Stress responsive alpha-beta barrel domain protein  32.32 
 
 		 146 aa  61.2  0.000000005  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0720467  n/a   
 
 
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NC_013161  Cyan8802_1498  Stress responsive alpha-beta barrel domain protein  32.94 
 
 		 97 aa  60.5  0.000000007  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
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NC_011726  PCC8801_1471  Stress responsive alpha-beta barrel domain protein  32.94 
 
 		 97 aa  60.5  0.000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
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NC_013730  Slin_4769  Stress responsive alpha-beta barrel domain protein  36.25 
 
 		 135 aa  59.7  0.00000001  Spirosoma linguale DSM 74  Bacteria  normal  0.353943  normal  1 
 
 
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NC_009456  VC0395_0877  stress responsive A/B barrel domain family protein  33.77 
 
 		 98 aa  58.9  0.00000002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
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NC_013037  Dfer_3797  Stress responsive alpha-beta barrel domain protein  34.34 
 
 		 129 aa  58.5  0.00000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
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NC_014148  Plim_1704  Stress responsive alpha-beta barrel domain protein  30.3 
 
 		 139 aa  57.4  0.00000007  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0682  stress responsive alpha-beta barrel domain-containing protein  32 
 
 		 98 aa  55.1  0.0000003  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
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NC_009784  VIBHAR_06521  hypothetical protein  29.7 
 
 		 98 aa  55.1  0.0000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_007802  Jann_3925  stress responsive alpha-beta  32.67 
 
 		 102 aa  53.1  0.000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
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BN001303  ANIA_08584  conserved hypothetical protein  32 
 
 		 111 aa  52.4  0.000002  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.209026 
 
 
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NC_008709  Ping_1942  stress responsive alpha-beta barrel domain-containing protein  30.3 
 
 		 98 aa  51.2  0.000005  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  0.0104011 
 
 
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NC_010676  Bphyt_4176  Xylose isomerase domain protein TIM barrel  40.62 
 
 		 394 aa  50.1  0.00001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.346853  hitchhiker  0.000695283 
 
 
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NC_008254  Meso_0181  stress responsive alpha-beta barrel  30 
 
 		 178 aa  45.8  0.0002  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.00134163  n/a   
 
 
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NC_009975  MmarC6_1768  stress responsive alpha-beta barrel domain-containing protein  29.07 
 
 		 100 aa  41.2  0.005  Methanococcus maripaludis C6  Archaea  normal  0.16129  n/a   
 
 
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NC_011365  Gdia_3400  Stress responsive alpha-beta barrel domain protein  29.73 
 
 		 220 aa  40.8  0.007  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.917675 
 
 
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