Gene TM1040_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3356 
Symbol 
ID4075255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp368123 
End bp368437 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content53% 
IMG OID638004864 
Productstress responsive alpha-beta barrel 
Protein accessionYP_611590 
Protein GI99078332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.426339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.411663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC ATTGTGTATT CTGCAATTTT TCCGACGAAG CTCGCGCAGT CGAGCAGCAT 
GCAGTGTTGT CAGAATTGCG CGATTTTGCC CTGTCGATCC GCCGCTGCAT GAGCGCGGAA
TTCGGGCCCA ATCGGGATTT CGAACAGAAG ACACAAGACT ACAGCTATGG GTTTGTCTTG
CAGTTCAAGG ACAAAGACGC CTTGGATGAA TACGCCAAAC ACCCGACCCA TATGGCTCTG
GCCGCGCGGC TGGTCGATCT TTGCGTCGGT GGGGCGGATA GTATTCTGGT CTATGATCTC
GAGGTTGAAG ACTGA
 
Protein sequence
MILHCVFCNF SDEARAVEQH AVLSELRDFA LSIRRCMSAE FGPNRDFEQK TQDYSYGFVL 
QFKDKDALDE YAKHPTHMAL AARLVDLCVG GADSILVYDL EVED