| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4176 |
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| Symbol | |
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| ID | 6277314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 220027 |
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| End bp | 221211 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615275 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_001887928 |
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| Protein GI | 187918897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.346853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000695283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGCC CAACCGGTCC TGTGCGGCAC ATGGTGTTCT GCCGGTTTCG CGCCGACGTC
ACGCCGGCGC GGCGGCTCGC GTTCTTCGAG CAGATTCGCC GGCTGACGGA AGTGCCCGGT
ATTGCCTTCA CGAACTTTCA GTGCGGGCCC AACGTATCGC CGGAAGGCTA CGGCATGAAC
TTCGCCGACG GCTTCATGAT GGACTTCGAG AGCGGGCAGC CTGCTTCGCG TATCTCGCCC
ATCCGACGCA TCAGGCGATC GGCGCGCGTC TGCTCGAAGC GCTCGATGGC GGCGCGCAAG
GCCTGCTCGT ATTCGATATC GATATGGAAA CTTATGAGAA ACCTGCAAGG AAGACTCGAC
CTGTGCTCCA TCAATACCGC GACGCTGGGG CATCGCGAGC CGCTCAGCCG CACGATTGAC
CGCATTGCCA AAGCCGGATT CGGCGGGATT GCGCCGTGGC GTCGCGAAGT CGAGGAAGCC
GATCTCGTGC AGATCGCAAG ACAGATCAAG GCGCTCGATC TCACCGTGAC CGGCTACTGC
CGCTCGACTT ACTTGCCGGC GGCGACGTCG GCGGAATTCA AGGCGAATGT CGAAGCGAAC
CGCGCTGCGT TGCGCGACGC GGCCATCCTC GGCGCGCGTT GTTTCGTGAT GGTGGTGGGT
GGGTTGCCCG AAGGCAGCCG CGATCTGGAC GGCGCGCGAA ACCAGGTCTC CGAGGGCATT
GAAATGTTGC TGGAAACCGC TCGCGATTGC GGCGTGCCGC TTGCGCTCGA ACCGCTGCAT
CCCGTGTACG CGGCCGACCG TGCCGTGCTC AACACCATCG CGCAGGCATT GGAGATTTGC
GAGCGCGTGG ATAGAGATCG CTCGGGGATG CTCGGCGTTG CCGTCGATGT CTATCATTGC
TGGTGGGATC CTGCCCTGAC GGCTTCAATC GAAGCAGCGG GACGCGCTGG GCGAATTCTT
GCGTATCACG CATGTGACTG GCTGCGCGAA ACGCGCGACG TGTTGCTCGA TCGGGGCATG
ATGGGCGATG GCGTCATCGA CCTGCCTGCC GTGCGGCAAA CCATTGAAAG TGCCGGCTAC
GAGGGTCTGG TCGAAGTCGA AATTTTCTCC GCGCAAGACT GGTGGCTGCG CGATCCAGAC
GAAGTTCTGG CAATCTGCGC GGACCGCTTG CAGAACTTCT GCTAG
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| Protein sequence | MSRPTGPVRH MVFCRFRADV TPARRLAFFE QIRRLTEVPG IAFTNFQCGP NVSPEGYGMN
FADGFMMDFE SGQPASRISP IRRIRRSARV CSKRSMAARK ACSYSISIWK LMRNLQGRLD
LCSINTATLG HREPLSRTID RIAKAGFGGI APWRREVEEA DLVQIARQIK ALDLTVTGYC
RSTYLPAATS AEFKANVEAN RAALRDAAIL GARCFVMVVG GLPEGSRDLD GARNQVSEGI
EMLLETARDC GVPLALEPLH PVYAADRAVL NTIAQALEIC ERVDRDRSGM LGVAVDVYHC
WWDPALTASI EAAGRAGRIL AYHACDWLRE TRDVLLDRGM MGDGVIDLPA VRQTIESAGY
EGLVEVEIFS AQDWWLRDPD EVLAICADRL QNFC
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