22 homologs were found in PanDaTox collection
for query gene VC0395_0877 on replicon NC_009456
Organism: Vibrio cholerae O395



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009456  VC0395_0877  stress responsive A/B barrel domain family protein  100 
 
 		 98 aa  201  2e-51  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_06521  hypothetical protein  66.33 
 
 		 98 aa  149  2e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_1942  stress responsive alpha-beta barrel domain-containing protein  68.37 
 
 		 98 aa  140  5e-33  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  0.0104011 
 
 
-
 
NC_009654  Mmwyl1_0682  stress responsive alpha-beta barrel domain-containing protein  54.08 
 
 		 98 aa  121  3e-27  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_3797  Stress responsive alpha-beta barrel domain protein  45.83 
 
 		 129 aa  102  2e-21  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_4769  Stress responsive alpha-beta barrel domain protein  35.42 
 
 		 135 aa  88.2  3e-17  Spirosoma linguale DSM 74  Bacteria  normal  0.353943  normal  1 
 
 
-
 
NC_014148  Plim_1704  Stress responsive alpha-beta barrel domain protein  36.73 
 
 		 139 aa  85.5  2e-16  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0045  stress responsive alpha-beta barrel domain-containing protein  39.6 
 
 		 102 aa  85.5  2e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_2425  Stress responsive alpha-beta barrel domain protein  33.33 
 
 		 146 aa  75.9  0.0000000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0720467  n/a   
 
 
-
 
NC_013161  Cyan8802_1498  Stress responsive alpha-beta barrel domain protein  33.33 
 
 		 97 aa  65.5  0.0000000002  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_1471  Stress responsive alpha-beta barrel domain protein  33.33 
 
 		 97 aa  65.5  0.0000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010172  Mext_0757  stress responsive alpha-beta barrel domain-containing protein  30 
 
 		 108 aa  59.7  0.00000001  Methylobacterium extorquens PA1  Bacteria  normal  0.203414  normal  1 
 
 
-
 
NC_011989  Avi_1061  hypothetical protein  33.77 
 
 		 102 aa  58.9  0.00000002  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011365  Gdia_3400  Stress responsive alpha-beta barrel domain protein  28.95 
 
 		 220 aa  57.4  0.00000006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.917675 
 
 
-
 
NC_011369  Rleg2_0625  Stress responsive alpha-beta barrel domain protein  31.37 
 
 		 102 aa  57.4  0.00000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.853408 
 
 
-
 
NC_012850  Rleg_0680  Stress responsive alpha-beta barrel domain protein  27.45 
 
 		 102 aa  53.1  0.000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0525544 
 
 
-
 
NC_008254  Meso_0181  stress responsive alpha-beta barrel  26.96 
 
 		 178 aa  48.5  0.00003  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.00134163  n/a   
 
 
-
 
NC_007333  Tfu_0763  hypothetical protein  22.68 
 
 		 97 aa  44.7  0.0005  Thermobifida fusca YX  Bacteria  normal  0.638539  n/a   
 
 
-
 
NC_002977  MCA0759  hypothetical protein  40 
 
 		 101 aa  42.7  0.002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1221  stress responsive alpha-beta barrel domain-containing protein  23.71 
 
 		 107 aa  42.4  0.002  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000118757  normal  0.123 
 
 
-
 
NC_008312  Tery_0681  stress responsive alpha-beta barrel  23.23 
 
 		 97 aa  42.7  0.002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.0110519 
 
 
-
 
NC_008043  TM1040_3356  stress responsive alpha-beta barrel  25.49 
 
 		 104 aa  42.4  0.002  Ruegeria sp. TM1040  Bacteria  normal  0.426339  normal  0.411663 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>