15 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
PICST_28199  CDS  NC_009068  607037  607372  +  336  predicted protein  XP_001387348  normal  1  decreased coverage  0.00737399  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_28468  CDS  NC_009068  1304044  1305132  -  1089  quinone oxidoreductase  XP_001387894  decreased coverage  0.00993002  normal  0.0416913  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_29193  CDS  NC_009068  3193794  3194984  -  1191  predicted protein  XP_001387182  decreased coverage  0.00865439  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_34117  CDS  NC_009068  592605  594725  +  2121  predicted protein  XP_001387344  decreased coverage  0.00012281  normal  0.103056  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_34689  CDS  NC_009068  3228746  3230689  +  1944  predicted protein  XP_001386942  decreased coverage  0.000996882  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_39517  CDS  NC_009068  2586586  2587836  -  1251  xylose transporter, high affinity, putative similarity to STL13  XP_001387067  decreased coverage  0.00000189877  normal  0.584414  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_51711  CDS  NC_009068  2149095  2151344  +  2250  predicted protein  XP_001387654  decreased coverage  0.00408227  normal  0.0250071  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_51919  CDS  NC_009068  768223  769905  +  1683  tRNA(m5U54)methyltransferase  XP_001387373  decreased coverage  0.00837808  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_52187  CDS  NC_009068  906636  907823  +  1188  Pex24p Integral peroxisomal membrane peroxin  XP_001387404  decreased coverage  0.000878159  normal  0.869225  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_53602  CDS  NC_009068  3149436  3150186  +  751  DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5)  XP_001386931  decreased coverage  0.0000357344  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_53707  CDS  NC_009068  3150492  3151289  -  798  predicted protein  XP_001387170  decreased coverage  0.0000516789  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_66402  CDS  NC_009068  1227678  1230200  -  2523  Myosin class V heavy chain  XP_001387881  normal  1  decreased coverage  0.00220738  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_75104  CDS  NC_009068  746197  747233  -  1037  hypothetical protein  XP_001387781  decreased coverage  0.00935914  normal  1  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_80517  CDS  NC_009068  614841  616618  -  1778  probable hexose transporter  XP_001387757  normal  0.663826  decreased coverage  0.00990002  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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PICST_86089  CDS  NC_009068  1505607  1507365  +  1759  amidase activity  XP_001387519  decreased coverage  0.00303647  normal  0.387343  Scheffersomyces stipitis CBS 6054  Eukaryota 
 
 
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