| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28468 |
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| Symbol | YMN1 |
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| ID | 4851246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1304044 |
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| End bp | 1305132 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392954 |
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| Product | quinone oxidoreductase |
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| Protein accession | XP_001387894 |
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| Protein GI | 126274232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00993002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0416913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTATTC CAAAAGAGTC AACCTGCTTT ATAGTCAACG AACAGCCTTA TGCCAAGGTC
AACTTCGATC TCAATGACGA AAAGAGCACT TTCAAGTTAA CTACCAAACC ATTGAGGGAA
ATTCAAAATG GCGAGTTGCT CATCAAAACC ATCTACCTCT CCAACGACCC TACACAAAGA
GCATGGATCC AGAAAGGAAT GAAGGCAGAC AGAATGTATG TGGAGCTTGT GGGGAAGAAT
CAGATTATGA GATCAGTGGG AATTGGCCAA GTAGTTCAGT CAAAACTTGA AGGGTACCAG
CCAGGTGACT ATGTTAACTG CGTTTTAAAC TGGTCTGACT ATGCTATTAT CAAAAAGGAT
GCCATCTACA ATAAAATCAC GAATAAATCG ATTCCGTTGA CCCAATATTT GGATGTATTG
GGAACTACTG GGATCACGGC TTACGTTGCT CTTCAGAAGG TTATAAGCTT GAAATCAACA
GATACCGTAG TCATCTCTGC CGCTTCTGGT GCTACAGGGA GTATGTGTGT ACAGATAGCC
AAGAAGGTCG TTGGGTGCAA AAAGGTGATT GGAATTTCAG GCTCAGAAGA TAAGTGCAAG
TGGGTTGAAA GTTTAGGTGC AGATGTCTGT GTCAACTACA AAAGCCCTAC CTTTGCCAAA
GACATGAGTG CTGCACTTGG AAAGGAGAAG TTCTGTGACG TCTACATGGA CAGTGTCGGC
GGAAAAATCT TGGACGTTAT GTTGGGCTTG ACCAAGCCAT TTGGTACAAT TCTTGCCTGT
GGAGCCATTG CAGGATACAA TGACTTCAAG AGTTCCATGA TTGCTAACTG GCCCCAAATC
ATTACAAACA GACTCACGGT TAAGGGGTTT ATTGTATTGG ACTTCAAGGA CAGCTACCCT
GAGGCGATTC AAGCAATTCT CAAGTGGATC AAAGAAGGCA AAGTTATAGC CAATGAATCA
TCATTTACAG TTGTGGATTT GACTTCTCCA GGGGATTTCA AGAAAATTCC AGAAACATGG
GGGTTGCTTT TCTCCGATAA AAAGGGGCCA GGTAAGTTGC TTACCAAGAT TGGATCGTCA
AAGCTTTAA
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| Protein sequence | MSIPKESTCF IVNEQPYAKV NFDLNDEKST FKLTTKPLRE IQNGELLIKT IYLSNDPTQR
AWIQKGMKAD RMYVELVGKN QIMRSVGIGQ VVQSKLEGYQ PGDYVNCVLN WSDYAIIKKD
AIYNKITNKS IPLTQYLDVL GTTGITAYVA LQKVISLKST DTVVISAASG ATGSMCVQIA
KKVVGCKKVI GISGSEDKCK WVESLGADVC VNYKSPTFAK DMSAALGKEK FCDVYMDSVG
GKILDVMLGL TKPFGTILAC GAIAGYNDFK SSMIANWPQI ITNRLTVKGF IVLDFKDSYP
EAIQAILKWI KEGKVIANES SFTVVDLTSP GDFKKIPETW GLLFSDKKGP GKLLTKIGSS
KL
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