| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53707 |
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| Symbol | |
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| ID | 4851906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3150492 |
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| End bp | 3151289 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393614 |
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| Product | predicted protein |
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| Protein accession | XP_001387170 |
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| Protein GI | 126275980 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000516789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTTATCTTCT TCTCCAGGTT TACACGCAAC CACCACCAAA TGTCGCTCAT ACCCTTGCCG
GAATCACTTG TGCCGTTCTT GGAGCCGTAT CTTCCGACTC CTAAGATTCA ACACCAAAAA
CGTCCTTTTG TAACTCTCAC ATATGCTCAA TCCCTAGACT CCAGAATAGC AGCCAAAAAG
GGTACCCAAA CTAAGATTTC CCACTTGGAA ACTAAGACGA TGACTCATTA TTTGAGATCA
AAGCACGATG CCATAATGGT GGCAATCGGA ACCGTTCAGG CAGATGATCC GAAGCTCAAT
TGCAGATACA GAGAAGATGG TAACGATCAC AGTCCAAGAC CTGTCATACT AGATCCACAT
GGAAAATGGA ACTATAGTGA ATCCCAATTG CGAGCAATCT GTGATAACAA GCAAGGGAAA
GCTCCTTATA TCATAATTGA AGAAAATGTC AAACCTAAAC AAGAAGACAT TGAAATATTA
CAAGAGCAGA ATGGACTCTT TATATATCTT CCATTATCTA CAGACCATTC TGCAAATTGG
GATCTCATAC TACAGAAGCT TCACGATCTT GGAGTAGAAT CAATAATGAT CGAGGGTGGT
GCTATGGTCA TCAATGAATT ACTAGATTTC CACAGGACGC AGCATGACTT GATCGACAGT
CTCATTATTA CTGTGGGACC CATTTTTCTA GGAAGCCAAG GTGTAGAAGT TAGTCCCAGA
AAGCAGGTTA ATCTTGAAGA CGTCAAGTGG TGGACTGGAG TCAGCGATAG TATAATATGT
GCCAAAGTAA CGAAGTAA
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| Protein sequence | FIFFSRFTRN HHQMSLIPLP ESLVPFLEPY LPTPKIQHQK RPFVTLTYAQ SLDSRIAAKK
GTQTKISHLE TKTMTHYLRS KHDAIMVAIG TVQADDPKLN CRYREDGNDH SPRPVILDPH
GKWNYSESQL RAICDNKQGK APYIIIEENV KPKQEDIEIL QEQNGLFIYL PLSTDHSANW
DLILQKLHDL GVESIMIEGG AMVINELLDF HRTQHDLIDS LIITVGPIFL GSQGVEVSPR
KQVNLEDVKW WTGVSDSIIC AKVTK
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