| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51711 |
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| Symbol | |
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| ID | 4851563 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2149095 |
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| End bp | 2151344 |
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| Gene Length | 2250 bp |
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| Protein Length | 736 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393271 |
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| Product | predicted protein |
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| Protein accession | XP_001387654 |
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| Protein GI | 126274866 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5647] Cullin, a subunit of E3 ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00408227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0250071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAGGACTTCA TGAGAGCCGT GATTCTCGAA TGGGACGAAC ATTTACAGCT GATGAAGTTT
GTCAGCGACG TTCTCATGTA TTTGAATCGT GTGTATGTAA AGGAGCAGAA AAAGTTGCTC
ATCTATGACT TGGGAATAGA GCTTTTCAAA GACAATGTTA TAAAGCACAA CCACGACGAA
GTGGGCCAAA AAATCGTTGA AATAGTAATC ACAGAAATTA CACGCAACCG TAGAGGCGAG
GTAATCACAA CGACGATGTA TATAACGAAA CTTATCAATA TGCTTGAGTT GTTGGTGGAG
TCTGGCGGTT CTGCGGATCT ACAGCAATAT GGTGAAAACT ACTACCAGAC TACTTTTGAA
CCGGCATTTC TCGGAAATTC AGAAACTTTC TTCTATAACT TCTCTCAGGA GCTAGTAAAC
TACAAGTTGG GCTCGCGATA CCTTCGTGAA GCCGCTCAGT TTGTCAAGGA AGAGGAAAAC
AGAATCAACT TCTACCTACC TTCTTCAACG TACCCTAAAC TCATAGACCT CATGAACAAC
ATCATTATCA AAGACAAAAT CGACGACATA ATCTCACTAC CTTACGAGCA ACAAGGACTT
TCCTACTGGT TGCAGCCAGT GATAGGAAAT ATCTTTGAAG ACAAAAATGA CAGTCATCAC
TTCGAGGAGC TAAGAATATT GTACCAGTTA ATAGGACGGT TTGCGGATGA TTTCCAGCTT
CTTCGATTAC GGTTGAAATC GAACATCATC TCTCAAGGAT CACAGCTTCC AGAGTTTGTC
AAAACCTCTC TCCAGAATGC TGGAGAAAAG AAAACTACCT ACAATTCCAC CGCGTTTGCC
ATCAAATGGA TAGATACGGT ATTGAGATAT CGAGAACAAA TATTCAAGTT GCTGTTGGAG
TCATTCCAAC TGGATCCAAT TATTGAGCAG ACTATCACAT ATGCCATGCG TGATTTCATC
AATGGCAATG GCAACAACAG GAAAAACTCA CCCATAGTCA ATGCGCCAGA GCTCTTGTCC
ATTTACATGG ATTATCATAT AAAGCAAAAA AGTAAGCCCT CACCTTCGAA AGACGTGAAT
TCAGACCTGA CAGAAGTGTT TATCAGCAAG TCTATTGAGT TCTTACGGTT TATCAAGGAC
AAGGATGCAT TTGAAGCAAA CTACGCCAAT CATTTTGCTA AACGATTTTT GAATTCTAAG
GGGACTACCC AGAACGGAAA TGCAAACAAT AAATTAGGCG TCGATTTGGA GGAATTAATA
CTCTCAAGAT TAGGTGAGGA AATGGGAACA ACGTCGTTGG CTAAGGTAAT AAAGATGAAC
AAGGACATAA AACTGTCGAA GGACACCACC TCCGATTGGA GGAAATATAC TATCAAAAAT
CAGGTGCCTG ATTTGGTTGA ACTTGAATTA AAAATCTGCA ATGTCACTGA TTGGCCCAAA
TCTATGACGA AGGACTACAA GTCATTTTCC AAGAGCGACA CTGGCGAAAT TCAATTCATA
TGGCCCAAGA AGTTGCGTAC TACTATGGGT GAATTTGAAG AGTTCTGGTT CTCGGGCAAG
AAGAACGACA ATAAATCCTT GTATTGGAGT CCTAAGTTTG GTTCCATGGA TATGAGAATT
ACATATCCTT CCAGAACTTA CGAAATCAAT TTGTCTACAT ATGCTGGGAT TATCATGTTA
CTTTTTGCTC CTCAGTCTTC CAATGCGGAC GGATCCATGG TGCTGGCGTT TGACGAAAAG
AAGGAATTAA CATACAACGA AATTCAAGAA CTTACAGGGA TACCCGAGGC GGATCTCAAG
AGACACTTGC AATCGATCGC AGTTGCTCCT AGACTGAGGT TGTTGGTGAA ACTGCCAATG
ACAAAGGAAG TCAATGACGA TGACGTCTTT AGATTGAATG AGAGCTTCAA ATCGCCTTCA
ATAAAGGTGA AGGTATTAAC AGTTTCTGCA GCTTCTTCAG TAGCACCAAC AAGATCCAAA
CCGAAGACAG AACAGGAAGA GGAGGCAGAA GAAGTTCAGA GCAATATTGC TGAGGGCCGG
AAGATTGAAG TCAATGCTGC TATTGTTCGT ATCATGAAGT CAAGACATAC AATTCGACAC
AACGAGCTTA TTGAAGAACT CATCAAGCAG TTGCAAAATC GATTCCAGCC ACTGATCTTG
TTGATCAAGC AACGCATAGA GGACTTGATA GAAAAAGAAT ACTTGAAGAG AGATGAAGAG
GAAAGAAACT TGTACCACTA TGTGGCATAG
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| Protein sequence | EDFMRAVILE WDEHLQLMKF VSDVLMYLNR VYVKEQKKLL IYDLGIELFK DNVIKHNHDE
VGQKIVEIVI TEITRNRRGE VITTTMYITK LINMLELLVE SGGSADLQQY GENYYQTTFE
PAFLGNSETF FYNFSQELVN YKLGSRYLRE AAQFVKEEEN RINFYLPSST YPKLIDLMNN
IIIKDKIDDI ISLPYEQQGL SYWLQPVIGN IFEDKNDSHH FEELRILYQL IGRFADDFQL
LRLRLKSNII SQGSQLPEFV KTSLQNAGEK KTTYNSTAFA IKWIDTVLRY REQIFKLLLE
SFQLDPIIEQ TITYAMRDFI NGNGNNRKNS PIVNAPELLS IYMDYHIKQK SKPSPSKDVN
SDLTESIEFL RFIKDKDAFE ANYANHFAKR FLNSKGTTQN GNANNKLGVD LEELILSRLG
EEMGTTSLAK VIKMNKDIKL SKDTTSDWRK YTIKNQVPDL VELELKICNV TDWPKSMTKD
YKSFSKSDTG EIQFIWPKKL RTTMGEFEEF WFSGKKNDNK SLYWSPKFGS MDMRITYPSR
TYEINLSTYA GIIMLLFAPQ SSNADGSMEL TYNEIQELTG IPEADLKRHL QSIAVAPRLR
LLVKLPMTKE VNDDDVFRLN ESFKSPSIKV KVLTVSAASS VAPTRSKPKT EQEEEAEEVQ
SNIAEGRKIE VNAAIVRIMK SRHTIRHNEL IEELIKQLQN RFQPLILLIK QRIEDLIEKE
YLKRDEEERN LYHYVA
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